RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 OGDHQ02218 1023 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 NRG1Q02297 640 aaPredicted RBP23.57■■□□□ 1.36
LSM4-201ENST00000252816 ZBTB16Q05516 673 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 ARL13BQ3SXY8 428 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 TRIM61Q5EBN2 209 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 STPG1Q5TH74 334 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 FAM72AQ5TYM5 149 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 MANEALQ5VSG8 457 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 FAM72DQ6L9T8 149 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 SETD3Q86TU7 594 aaPredicted RBP23.57■■□□□ 1.36
LSM4-201ENST00000252816 FAM72BQ86X60 149 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 FRS2Q8WU20 508 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 FAM129BQ96TA1 746 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 RTKNQ9BST9 563 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 EDEM2Q9BV94 578 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 ZYG11BQ9C0D3 744 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 OSBPL2Q9H1P3 480 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 PPARGC1AQ9UBK2 798 aaKnown RBP23.57■■□□□ 1.36
LSM4-201ENST00000252816 OR12D3Q9UGF7 316 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 EVLQ9UI08 416 aaPredicted RBP23.57■■□□□ 1.36
LSM4-201ENST00000252816 NUMA1Q14980 2115 aa23.57■■□□□ 1.36
LSM4-201ENST00000252816 DCDC2BA2VCK2 349 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 SNAP91O60641 907 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 FTLP02792 175 aaPredicted RBP23.56■■□□□ 1.36
LSM4-201ENST00000252816 DNTTP04053 509 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 GZMAP12544 262 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 MAOBP27338 520 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 ACSL1P33121 698 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 HOXD12P35452 270 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 NNMTP40261 264 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 DPP6P42658 865 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 VASPP50552 380 aaPredicted RBP23.56■■□□□ 1.36
LSM4-201ENST00000252816 MAMLD1Q13495 774 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 HGSNATQ68CP4 663 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 PPP1R2P3Q6NXS1 205 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 DGLUCYQ7Z3D6 616 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 MMAAQ8IVH4 418 aaKnown RBP23.56■■□□□ 1.36
LSM4-201ENST00000252816 STK40Q8N2I9 435 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 CPLX3Q8WVH0 158 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 FOXJ1Q92949 421 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 NTAN1Q96AB6 310 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 DOCK4Q8N1I0 1966 aa23.56■■□□□ 1.36
LSM4-201ENST00000252816 ATP9BO43861 1147 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 MT-CO1P00395 513 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 OR1E1P30953 314 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 TTC31Q49AM3 519 aaPredicted RBP23.55■■□□□ 1.36
LSM4-201ENST00000252816 C6orf118Q5T5N4 469 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 PLEKHA7Q6IQ23 1121 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 DCUN1D2Q6PH85 259 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 SLC23A3Q6PIS1 610 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 CADM4Q8NFZ8 388 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 CNPY3Q9BT09 278 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 XPO4Q9C0E2 1151 aaKnown RBP23.55■■□□□ 1.36
LSM4-201ENST00000252816 PABPC3Q9H361 631 aaKnown RBP23.55■■□□□ 1.36
LSM4-201ENST00000252816 SERGEFQ9UGK8 458 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 VPS51Q9UID3 782 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 SLC25A13Q9UJS0 675 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 CAPN11Q9UMQ6 739 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 NEU3Q9UQ49 428 aa23.55■■□□□ 1.36
LSM4-201ENST00000252816 PI4KAP42356 2102 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 ANKRD62A6NC57 917 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 MID1O15344 667 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 PLEKP08567 350 aaPredicted RBP23.54■■□□□ 1.36
LSM4-201ENST00000252816 SCAPQ12770 1279 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 CST6Q15828 149 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 DUOXA1Q1HG43 343 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 RGL4Q8IZJ4 473 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 SH2D3CQ8N5H7 860 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 OR7D4Q8NG98 312 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 SYN2Q92777 582 aaPredicted RBP23.54■■□□□ 1.36
LSM4-201ENST00000252816 TSPY26PQ9H489 355 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 C6orf106Q9H6K1 298 aaPredicted RBP23.54■■□□□ 1.36
LSM4-201ENST00000252816 FSCN3Q9NQT6 498 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 PARVAQ9NVD7 372 aa23.54■■□□□ 1.36
LSM4-201ENST00000252816 ILVBLA1L0T0 632 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 METTL12A8MUP2 240 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 RNASEH1O60930 286 aaKnown RBP23.53■■□□□ 1.36
LSM4-201ENST00000252816 RTN2O75298 545 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 LRIG2O94898 1065 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 GYPCP04921 128 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 CFIP05156 583 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 GLDCP23378 1020 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 ZBED6P86452 979 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 NFKBIBQ15653 356 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 DLG2Q15700 870 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 ACCSLQ4AC99 568 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 SYCP2LQ5T4T6 812 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 DCAF12L1Q5VU92 463 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 RWDD4Q6NW29 188 aaKnown RBP23.53■■□□□ 1.36
LSM4-201ENST00000252816 SCYL2Q6P3W7 929 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 LRSAM1Q6UWE0 723 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 ERMP1Q7Z2K6 904 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 SLFN11Q7Z7L1 901 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 NLRP14Q86W24 1093 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 DRC7Q8IY82 874 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 PYROXD2Q8N2H3 581 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 DCAF4L2Q8NA75 395 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 DNASE2BQ8WZ79 361 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 C2orf49Q9BVC5 232 aaPredicted RBP23.53■■□□□ 1.36
LSM4-201ENST00000252816 BTBD1Q9H0C5 482 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms