RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ATG7O95352 703 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 INHBCP55103 352 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 PLIN5Q00G26 463 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ITKQ08881 620 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 MPP3Q13368 585 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 PTK2BQ14289 1009 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 KLHDC10Q6PID8 442 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 ZNF534Q76KX8 674 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 SLC41A1Q8IVJ1 513 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 FCRL3Q96P31 734 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-201ENST00000252597 C2orf40Q9H1Z8 148 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
USHBP1-201ENST00000252597 A0A0A0MRY4 1105 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 DFFAO00273 331 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 KLF11O14901 512 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 PMPCBO75439 489 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 CKMT2P17540 419 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 GRK2P25098 689 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 ABCD1P33897 745 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 PTPN7P35236 360 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 MS4A2Q01362 244 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 MTX3Q5HYI7 312 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 XRRA1Q6P2D8 792 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 ARCQ7LC44 396 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 CATSPER4Q7RTX7 472 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 URGCPQ8TCY9 931 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 TMIGD2Q96BF3 282 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 SPATA13Q96N96 652 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 SORT1Q99523 831 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 SOWAHBA6NEL2 793 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
USHBP1-201ENST00000252597 SNNO75324 88 aaPredicted RBP12.21□□□□□ -0.45
USHBP1-201ENST00000252597 METTL7BQ6UX53 244 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 TMEM79Q9BSE2 394 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 ZNF180Q9UJW8 692 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 NUDT5Q9UKK9 219 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 COMMD3-BMI1R4GMX3 469 aa12.21□□□□□ -0.45
USHBP1-201ENST00000252597 CCL22O00626 93 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 VAPBO95292 243 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 THRAP10827 490 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 PTPN1P18031 435 aaKnown RBP12.21□□□□□ -0.46
USHBP1-201ENST00000252597 L1CAMP32004 1257 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 SLC12A1Q13621 1099 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 TBCCQ15814 346 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 AGKQ53H12 422 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 TSHZ1Q6ZSZ6 1077 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 TRIM67Q6ZTA4 783 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 ZNF786Q8N393 782 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.21□□□□□ -0.46
USHBP1-201ENST00000252597 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.46
USHBP1-201ENST00000252597 TEPSINQ96N21 525 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 ACE2Q9BYF1 805 aaPredicted RBP12.21□□□□□ -0.46
USHBP1-201ENST00000252597 CDH19Q9H159 772 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 TRPC7Q9HCX4 862 aa12.21□□□□□ -0.46
USHBP1-201ENST00000252597 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.46
USHBP1-201ENST00000252597 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 RNF103-CHMP3A0A140T963 221 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 ARHGEF37A1IGU5 675 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 BIRC5O15392 142 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 CLIC3O95833 236 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 PPIDQ08752 370 aaKnown RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 KCTD2Q14681 263 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 KIF19Q2TAC6 998 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 ZNF567Q8N184 647 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 UBR7Q8N806 425 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 MTMR14Q8NCE2 650 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 HSPBAP1Q96EW2 488 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 VPS33BQ9H267 617 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 GPAMQ9HCL2 828 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 EPS15L1Q9UBC2 864 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 CDYLQ9Y232 598 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 B4GALT4O60513 344 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 MOCS2O96007 188 aaPredicted RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 FAM58BPP0C7Q3 252 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 PSMC3P17980 439 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 PGAM1P18669 254 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 CSHL1Q14406 222 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 GRM3Q14832 879 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 ANO4Q32M45 955 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 MYLK3Q32MK0 819 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 FKBP1CQ5VVH2 108 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 CYP4V2Q6ZWL3 525 aaPredicted RBP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 KCNMB4Q86W47 210 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 DENND6AQ8IWF6 608 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 ZFP28Q8NHY6 868 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 RNF139Q8WU17 664 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 LRTOMTQ8WZ04 291 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
USHBP1-201ENST00000252597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.2□□□□□ -0.46
USHBP1-201ENST00000252597 EGFL7Q9UHF1 273 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms