RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CFAP47Q6ZTR5 3102 aa21.67■■□□□ 1.06
NEDD8-201ENST00000250495 A0A1B0GTQ1 180 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 C10orf142B7Z368 130 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 PAGE1O75459 146 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 DKK1O94907 266 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 CAPNS1P04632 268 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ERCC5P28715 1186 aaPredicted RBP21.66■■□□□ 1.06
NEDD8-201ENST00000250495 NUMBP49757 651 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ADPRHP54922 357 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 KCNJ12Q14500 433 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 C5orf22Q49AR2 442 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 SLC45A4Q5BKX6 768 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 TMPRSS7Q7RTY8 843 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ALG14Q96F25 216 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ELF4Q99607 663 aaPredicted RBP21.66■■□□□ 1.06
NEDD8-201ENST00000250495 TUBGCP2Q9BSJ2 902 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 SIK2Q9H0K1 926 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 KDM4CQ9H3R0 1056 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 WDCPQ9H6R7 721 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.66■■□□□ 1.06
NEDD8-201ENST00000250495 CHMP5Q9NZZ3 219 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 DACH1Q9UI36 760 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 STAP1Q9ULZ2 295 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 PAXBP1Q9Y5B6 917 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ZFHX4Q86UP3 3567 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 ASPMQ8IZT6 3477 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 FAM208BQ5VWN6 2430 aa21.66■■□□□ 1.06
NEDD8-201ENST00000250495 PLXNB3Q9ULL4 1909 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 PLXNA2O75051 1894 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 GOLGA8CPA6NN73 597 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 SLC7A4O43246 635 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 ATP9BO43861 1147 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 F9P00740 461 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 VAV1P15498 845 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 CDH4P55283 916 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 RNASE9P60153 205 aaKnown RBP21.65■■□□□ 1.06
NEDD8-201ENST00000250495 CENPCQ03188 943 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 DLG2Q15700 870 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 BRMS1LQ5PSV4 323 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 PRPF39Q86UA1 669 aaKnown RBP21.65■■□□□ 1.06
NEDD8-201ENST00000250495 PROSER1Q86XN7 944 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 C18orf8Q96DM3 657 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 SERAC1Q96JX3 654 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 NPY6RQ99463 290 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 CLSTN2Q9H4D0 955 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 PLCB1Q9NQ66 1216 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 VPS28Q9UK41 221 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 TBC1D30Q9Y2I9 924 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 PTPRBP23467 1997 aa21.65■■□□□ 1.06
NEDD8-201ENST00000250495 ALOX15BO15296 676 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 WNT1P04628 370 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 PNMA6AP0CW24 399 aaPredicted RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 ZNF18P17022 549 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 CDH5P33151 784 aaPredicted RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 DRD3P35462 400 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 CXCR3P49682 368 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 IL9RQ01113 521 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 DRAP1Q14919 205 aaPredicted RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 ACBD5Q5T8D3 534 aaPredicted RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 C14orf80Q86SX3 495 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 GALNT15Q8N3T1 639 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 TKTL2Q9H0I9 626 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 CCDC86Q9H6F5 360 aaKnown RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 GDF3Q9NR23 364 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 PIGVQ9NUD9 493 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 ARHGEF38Q9NXL2 777 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 RALYQ9UKM9 306 aaKnown RBP21.64■■□□□ 1.05
NEDD8-201ENST00000250495 OR51B4Q9Y5P0 310 aa21.64■■□□□ 1.05
NEDD8-201ENST00000250495 A0A1W2PR77 199 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 C1QTNF3-AMACRE9PGA6 284 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 TAF4O00268 1085 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 MCF2LO15068 1137 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 YKT6O15498 198 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 LATO43561 262 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 CYP11B1P15538 503 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 NUDT1P36639 197 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 SCNN1AP37088 669 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 GABRB2P47870 512 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 IRAK1P51617 712 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 KRT83P78385 493 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 RAPGEF1Q13905 1077 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 MIIPQ5JXC2 388 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 PRAMEF14Q5SWL7 426 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 DPY19L2P1Q6NXN4 242 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 LRRC31Q6UY01 552 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 ERICH1Q86X53 443 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 SH2D3CQ8N5H7 860 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 OR52K2Q8NGK3 314 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 NT5C3BQ969T7 300 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 FAM131CQ96AQ9 280 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 PGAP3Q96FM1 320 aaPredicted RBP21.63■■□□□ 1.05
NEDD8-201ENST00000250495 MUC3BQ9H195 1237 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 FTSJ1Q9UET6 329 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 PPM1HQ9ULR3 514 aa21.63■■□□□ 1.05
NEDD8-201ENST00000250495 FARP1Q9Y4F1 1045 aaPredicted RBP21.63■■□□□ 1.05
NEDD8-201ENST00000250495 NYNRINQ9P2P1 1898 aaKnown RBP21.62■■□□□ 1.05
NEDD8-201ENST00000250495 GOLGA4Q13439 2230 aaKnown RBP21.62■■□□□ 1.05
NEDD8-201ENST00000250495 TLR4O00206 839 aa21.62■■□□□ 1.05
NEDD8-201ENST00000250495 PES1O00541 588 aaKnown RBP21.62■■□□□ 1.05
NEDD8-201ENST00000250495 ADCY5O95622 1261 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms