RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FEM1AQ9BSK4 669 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 TRPV5Q9NQA5 729 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 DUSP12Q9UNI6 340 aa20.64■□□□□ 0.89
SNRPA-201ENST00000243563 ILVBLA1L0T0 632 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 SNAP91O60641 907 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 ZFXP17010 805 aaPredicted RBP20.63■□□□□ 0.89
SNRPA-201ENST00000243563 NDST2P52849 883 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 GALNT2Q10471 571 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 POLD3Q15054 466 aaPredicted RBP20.63■□□□□ 0.89
SNRPA-201ENST00000243563 CCDC181Q5TID7 509 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 LEKR1Q6ZMV7 388 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 KIAA0907Q7Z7F0 614 aaPredicted RBP20.63■□□□□ 0.89
SNRPA-201ENST00000243563 ZC3H18Q86VM9 953 aaKnown RBP20.63■□□□□ 0.89
SNRPA-201ENST00000243563 P3H4Q92791 437 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 EZH1Q92800 747 aaPredicted RBP20.63■□□□□ 0.89
SNRPA-201ENST00000243563 DNASE1L2Q92874 299 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 LGMNQ99538 433 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 SLC2A4RGQ9NR83 387 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 GGA2Q9UJY4 613 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 TRIOO75962 3097 aa20.63■□□□□ 0.89
SNRPA-201ENST00000243563 PRRT4C9JH25 899 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 SPECC1L-ADORA2AF8WAN1 911 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 J3KR12 359 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 CTHP32929 405 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 CTSOP43234 321 aaPredicted RBP20.62■□□□□ 0.89
SNRPA-201ENST00000243563 DGKGP49619 791 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 NR1H3Q13133 447 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 SNX1Q13596 522 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 PITRM1Q5JRX3 1037 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 ADIPOR2Q86V24 386 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNRPA-201ENST00000243563 ACE2Q9BYF1 805 aaPredicted RBP20.62■□□□□ 0.89
SNRPA-201ENST00000243563 SLC2A11Q9BYW1 496 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 MUC3BQ9H195 1237 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 RETREG1Q9H6L5 497 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 DNPEPQ9ULA0 475 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 PIAS3Q9Y6X2 628 aa20.62■□□□□ 0.89
SNRPA-201ENST00000243563 PABPC1P11940 636 aaKnown RBP20.61■□□□□ 0.89
SNRPA-201ENST00000243563 VAV1P15498 845 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 SERPINB6P35237 376 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 NRLP54845 237 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 SERINC3Q13530 473 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 PLEKHG6Q3KR16 790 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 DNTTIP2Q5QJE6 756 aaKnown RBP20.61■□□□□ 0.89
SNRPA-201ENST00000243563 TTC27Q6P3X3 843 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 LZTR1Q8N653 840 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 SLC35B2Q8TB61 432 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 ZNF419Q96HQ0 510 aaPredicted RBP20.61■□□□□ 0.89
SNRPA-201ENST00000243563 XPO6Q96QU8 1125 aaKnown RBP20.61■□□□□ 0.89
SNRPA-201ENST00000243563 SPON2Q9BUD6 331 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 MAGEH1Q9H213 219 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 PRDM16Q9HAZ2 1276 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 KIAA1522Q9P206 1035 aaPredicted RBP20.61■□□□□ 0.89
SNRPA-201ENST00000243563 SORCS3Q9UPU3 1222 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 ATG2BQ96BY7 2078 aa20.61■□□□□ 0.89
SNRPA-201ENST00000243563 LIASO43766 372 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 MAFKO60675 156 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 ZMPSTE24O75844 475 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 GARSP41250 739 aaKnown RBP20.6■□□□□ 0.89
SNRPA-201ENST00000243563 YBEYP58557 167 aaPredicted RBP20.6■□□□□ 0.89
SNRPA-201ENST00000243563 EIF3EP60228 445 aaKnown RBP20.6■□□□□ 0.89
SNRPA-201ENST00000243563 ARF5P84085 180 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 PARP15Q460N3 678 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 GRAMD4Q6IC98 578 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 SORCS1Q8WY21 1168 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 ATP13A1Q9HD20 1204 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 VPS51Q9UID3 782 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 MUTYHQ9UIF7 546 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 VPS28Q9UK41 221 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 HCN2Q9UL51 889 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 SLC27A6Q9Y2P4 619 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 KRIT1O00522 736 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 CD160O95971 181 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 PEX11BO96011 259 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 KCNJ1P48048 391 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 GALK1P51570 392 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 PLK1P53350 603 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 IL31Q6EBC2 164 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 LINGO4Q6UY18 593 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 LRRN4CLQ8ND94 238 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 PDFQ9HBH1 243 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 RBM12Q9NTZ6 932 aaKnown RBP20.6■□□□□ 0.89
SNRPA-201ENST00000243563 DEC1Q9P2X7 70 aa20.6■□□□□ 0.89
SNRPA-201ENST00000243563 CD72P21854 359 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 NR2C2P49116 596 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 C2orf54Q08AI8 447 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 PRKD1Q15139 912 aaPredicted RBP20.59■□□□□ 0.89
SNRPA-201ENST00000243563 PON2Q15165 354 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 OASLQ15646 514 aaKnown RBP20.59■□□□□ 0.89
SNRPA-201ENST00000243563 SLC44A4Q53GD3 710 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 ZNF783Q6ZMS7 281 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 ZNF354CQ86Y25 554 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNRPA-201ENST00000243563 GJD3Q8N144 294 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 ATPAF2Q8N5M1 289 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 TERB1Q8NA31 727 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 QKIQ96PU8 341 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNRPA-201ENST00000243563 ZDHHC4Q9NPG8 344 aa20.59■□□□□ 0.89
SNRPA-201ENST00000243563 IPO11Q9UI26 975 aaKnown RBP20.59■□□□□ 0.89
SNRPA-201ENST00000243563 CA14Q9ULX7 337 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms