RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZNF77Q15935 545 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TRMT11Q7Z4G4 463 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 HTR3CQ8WXA8 447 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 LRRC3Q9BY71 257 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM72CH0Y354 149 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 KLKB1P03952 638 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 ASLP04424 464 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SEC13P55735 322 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SNRPD1P62314 119 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TNK2Q07912 1038 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 GPS1Q13098 491 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 DMC1Q14565 340 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 ALFQ53S48 1182 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM72AQ5TYM5 149 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 MBLAC2Q68D91 279 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM72DQ6L9T8 149 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM72BQ86X60 149 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 PLD5Q8N7P1 536 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 ACDQ96AP0 544 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 PAK5Q9P286 719 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 CA14Q9ULX7 337 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 ACADMP11310 421 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 IL9P15248 144 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 GBE1Q04446 702 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 B4GALNT4Q76KP1 1039 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 KDELC2Q7Z4H8 507 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 SAMD15Q9P1V8 674 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 TTC7AQ9ULT0 858 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
TNFAIP3-201ENST00000237289 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 PSMD3O43242 534 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 MFSD11O43934 449 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC4A1P02730 911 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC20A2Q08357 652 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 TMCO4Q5TGY1 634 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 FGF14Q92915 247 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 HMCESQ96FZ2 354 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 VAT1Q99536 393 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 LTBRP36941 435 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 COILP38432 576 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 PEX5P50542 639 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SMAD2Q15796 467 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 C2orf27AQ580R0 203 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC45A4Q5BKX6 768 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 C4orf22Q6V702 233 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 TPRG1Q6ZUI0 275 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 ADGRG2Q8IZP9 1017 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 MSLNLQ96KJ4 702 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 TM6SF2Q9BZW4 377 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 RAB6BQ9NRW1 208 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SUN2Q9UH99 717 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 AMACRQ9UHK6 382 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 ANXA9O76027 345 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 CCNB1P14635 433 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 FNTAP49354 379 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 USP4Q13107 963 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 DHX34Q14147 1143 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 MPP7Q5T2T1 576 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 VITQ6UXI7 678 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZNF852Q6ZMS4 543 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 GABPB2Q8TAK5 448 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 LGMNQ99538 433 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC39A8Q9C0K1 460 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 ANAPC5Q9UJX4 755 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
TNFAIP3-201ENST00000237289 TULP3O75386 442 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 CYP17A1P05093 508 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC6A4P31645 630 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 WASP42768 502 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 ECT2LQ008S8 904 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 GUCY2DQ02846 1103 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 PCSK7Q16549 785 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 BHLHA9Q7RTU4 235 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 PCGF5Q86SE9 256 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 VSIG1Q86XK7 387 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 GJD3Q8N144 294 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 ASIC4Q96FT7 647 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 RPL10LQ96L21 214 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 TRHDEQ9UKU6 1024 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 V9GYY5 206 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 OLFM2O95897 454 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 EPHX1P07099 455 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 SERPINF2P08697 491 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 RBL1P28749 1068 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 GRIA2P42262 883 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 LRRC32Q14392 662 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 ARFGAP1Q8N6T3 406 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 GOLGA6L1Q8N7Z2 621 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 ERLEC1Q96DZ1 483 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 CEP41Q9BYV8 373 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms