RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PGM3O95394 542 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 EIF4BP23588 611 aaKnown RBP13.6□□□□□ -0.23
NEK4-201ENST00000233027 SLC26A2P50443 739 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 CDK7P50613 346 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 SLC45A4Q5BKX6 768 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 ZNF621Q6ZSS3 439 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 LGI2Q8N0V4 545 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 CYP4Z2PQ8N1L4 340 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 KCNQ5Q9NR82 932 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 PCYOX1Q9UHG3 505 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 FRG1Q14331 258 aaKnown RBP13.6□□□□□ -0.23
NEK4-201ENST00000233027 DGUOKQ16854 277 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
NEK4-201ENST00000233027 ZNF280DQ6N043 979 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 SPATA6LQ8N4H0 392 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 SAMD3Q8N6K7 520 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 CPA4Q9UI42 421 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 SPACA6W5XKT8 324 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
NEK4-201ENST00000233027 MAP3K13O43283 966 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 GSTT1P30711 240 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 GRK3P35626 688 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 GRIA3P42263 894 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 RENBPP51606 427 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 ITGADQ13349 1161 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 QPCTQ16769 361 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 LRRIQ1Q96JM4 1722 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 NCANO14594 1321 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 WTIPA6NIX2 430 aaPredicted RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 COX4I1P13073 169 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 BDNFP23560 247 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PLCL1Q15111 1095 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PREPLQ4J6C6 727 aaPredicted RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 KLHL17Q6TDP4 642 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 DPP10Q8N608 796 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PRKD2Q9BZL6 878 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 CEP44Q9C0F1 390 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 LRRC10BA6NIK2 292 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 MFN2O95140 757 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 RPL22P35268 128 aaKnown RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 MAGEA10P43363 369 aaPredicted RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 CNTN2Q02246 1040 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 EXOC3L1Q86VI1 746 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 NDNQ99608 321 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 ANPEPP15144 967 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PARP6Q2NL67 630 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 B3GNT6Q6ZMB0 384 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 ZDHHC13Q8IUH4 622 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 MECRQ9BV79 373 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PLA2G4CQ9UP65 541 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 TPRKBQ9Y3C4 175 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 ABCA9Q8IUA7 1624 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
NEK4-201ENST00000233027 CKBP12277 381 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 MYL4P12829 197 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 NAB1Q13506 487 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 TMEM132BQ14DG7 1078 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 SCARA3Q6AZY7 606 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PRELID2Q8N945 189 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 BAP1Q92560 729 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 COQ7Q99807 217 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 OMDQ99983 421 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 VPS45Q9NRW7 570 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 TMEM51Q9NW97 253 aa13.59□□□□□ -0.23
NEK4-201ENST00000233027 PSMD12O00232 456 aaPredicted RBP13.58□□□□□ -0.23
NEK4-201ENST00000233027 MED26O95402 600 aa13.58□□□□□ -0.23
NEK4-201ENST00000233027 PDK3Q15120 406 aa13.58□□□□□ -0.23
NEK4-201ENST00000233027 ULBP1Q9BZM6 244 aa13.58□□□□□ -0.23
NEK4-201ENST00000233027 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.23
NEK4-201ENST00000233027 PRKCIP41743 596 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 ATP12AP54707 1039 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 EPHB3P54753 998 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 SLC39A12Q504Y0 691 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 C11orf88Q6PI97 169 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 HAS1Q92839 578 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 MAGEB10Q96LZ2 347 aaPredicted RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 CNGB3Q9NQW8 809 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 CATSPERZQ9NTU4 200 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 ADPRHL2Q9NX46 363 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 RGL2O15211 777 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 AVILO75366 819 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 KCNH1O95259 989 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 GPSM1Q86YR5 675 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 ANAPC2Q9UJX6 822 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 TK2O00142 265 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms