RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MAFKO60675 156 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 MAP3K6O95382 1288 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 ITGAVP06756 1048 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 RHOCP08134 193 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 CISD3P0C7P0 127 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 RBP3P10745 1247 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 HLA-FP30511 346 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 CHRNA3P32297 505 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 GJA4P35212 333 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 EIF2DP41214 584 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 FNTAP49354 379 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 PAPOLAP51003 745 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 EIF3EP60228 445 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 ZP2Q05996 745 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 PPIDQ08752 370 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 LMAN2Q12907 356 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 SERINC3Q13530 473 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 CDH18Q13634 790 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 PRKD1Q15139 912 aaPredicted RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 TTC27Q6P3X3 843 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 NETO2Q8NC67 525 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 MNS1Q8NEH6 495 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 ATG4AQ8WYN0 398 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 MAGOHBQ96A72 148 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 HMCESQ96FZ2 354 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 XPO6Q96QU8 1125 aaKnown RBP14.38□□□□□ -0.11
SEC61B-201ENST00000223641 FEM1AQ9BSK4 669 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 CARD6Q9BX69 1037 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 BRD9Q9H8M2 597 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 PCYOX1Q9UHG3 505 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
SEC61B-201ENST00000223641 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 PPP1R12AO14974 1030 aaPredicted RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 MCF2LO15068 1137 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 CCNCP24863 283 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 MZF1P28698 734 aaPredicted RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ACVRL1P37023 503 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ETFBP38117 255 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 COILP38432 576 aaPredicted RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 SLC45A4Q5BKX6 768 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 RNF219Q5W0B1 726 aaPredicted RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 CCDC117Q8IWD4 279 aaPredicted RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 PHTF2Q8N3S3 785 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 OR7D4Q8NG98 312 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 ATXN2LQ8WWM7 1075 aaKnown RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 DNASE1L2Q92874 299 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 SLCO2A1Q92959 643 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 QKIQ96PU8 341 aaKnown RBP eCLIP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 LGMNQ99538 433 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 FAM118BQ9BPY3 351 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 USP29Q9HBJ7 922 aa14.37□□□□□ -0.11
SEC61B-201ENST00000223641 INTS6Q9UL03 887 aaKnown RBP14.37□□□□□ -0.11
SEC61B-201ENST00000223641 SHROOM3Q8TF72 1996 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CTAGE15A4D2H0 777 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 DFFAO00273 331 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 KDELR3O43731 214 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 TULP3O75386 442 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ZNF189O75820 626 aaPredicted RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ZMPSTE24O75844 475 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 PEX11BO96011 259 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ASGR2P07307 311 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CTAGE8P0CG41 777 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 BMP1P13497 986 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CD70P32970 193 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 OPRD1P41143 372 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CSKP41240 450 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 IL10RBQ08334 325 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 DMC1Q14565 340 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 PLEKHG6Q3KR16 790 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CCDC137Q6PK04 289 aaKnown RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ARHGAP36Q6ZRI8 547 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CTAGE6Q86UF2 777 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 C12orf40Q86WS4 652 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 CTAGE4Q8IX94 777 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 NAT16Q8N8M0 369 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 TFB1MQ8WVM0 346 aaKnown RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ACDQ96AP0 544 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 RUNDC3BQ96NL0 473 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 PDFQ9HBH1 243 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 SLC2A4RGQ9NR83 387 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 ABCB8Q9NUT2 735 aa14.36□□□□□ -0.11
SEC61B-201ENST00000223641 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 IPO11Q9UI26 975 aaKnown RBP14.36□□□□□ -0.11
SEC61B-201ENST00000223641 A0A0A0MRY4 1105 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 CFAP69A5D8W1 941 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 TRIM24O15164 1050 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 PRAMEF11O60813 436 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 PABPC1P11940 636 aaKnown RBP14.35□□□□□ -0.11
SEC61B-201ENST00000223641 VAV1P15498 845 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 RBL1P28749 1068 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms