RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ASB2Q96Q27 587 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 KCNMB3Q9NPA1 279 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 TNPO3Q9Y5L0 923 aaKnown RBP19.26■□□□□ 0.67
SMPD3-201ENST00000219334 GTF2BQ00403 316 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 KCNMA1Q12791 1236 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 NEPROQ6NW34 567 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 NYAP1Q6ZVC0 841 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 RBM23Q86U06 439 aaKnown RBP19.26■□□□□ 0.67
SMPD3-201ENST00000219334 TMBIM4Q9HC24 238 aa19.26■□□□□ 0.67
SMPD3-201ENST00000219334 TISP43B9A030 160 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 RGS14O43566 566 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 VPS4BO75351 444 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 CAPSQ13938 189 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 WDR93Q6P2C0 686 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 PRR23CQ6ZRP0 262 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 SCUBE1Q8IWY4 988 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 GPSM3Q9Y4H4 160 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 OR6C75A6NL08 312 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 SIGLEC16A6NMB1 481 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 KPNA5O15131 536 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 CDC25CP30307 473 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 CCR4P51679 360 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 TM6SF2Q9BZW4 377 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 RAD21L1Q9H4I0 556 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 NAALADL1Q9UQQ1 740 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 ZSCAN5CA6NGD5 496 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 DDX3XO00571 662 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 CNOT3O75175 753 aaKnown RBP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 VHLP40337 213 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 HSPA14Q0VDF9 509 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 RASA2Q15283 850 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 FAM110CQ1W6H9 321 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 FAM126BQ8IXS8 530 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 ATL1Q8WXF7 558 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 PIF1Q9H611 641 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 SMIM22K7EJ46 135 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 USP12O75317 370 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 ANXA5P08758 320 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 PECAM1P16284 738 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 SLC1A6P48664 564 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 ITGA7Q13683 1181 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 ANKRD52Q8NB46 1076 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 CNBD2Q96M20 576 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 PURBQ96QR8 312 aaKnown RBP19.25■□□□□ 0.67
SMPD3-201ENST00000219334 TBC1D23Q9NUY8 699 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 NDUFAF1Q9Y375 327 aa19.25■□□□□ 0.67
SMPD3-201ENST00000219334 TK2O00142 265 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 CALB2P22676 271 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 KDELR1P24390 212 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 IRF8Q02556 426 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 LRRC49Q8IUZ0 686 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 HGH1Q9BTY7 390 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 RERGLQ9H628 205 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 AGRPO00253 132 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 RGS5O15539 181 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 OR6A2O95222 327 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 UQCRBP14927 111 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 NTSP30990 170 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 CLK2P49760 499 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 PCID2Q5JVF3 399 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 KCNK18Q7Z418 384 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 PSTKQ8IV42 348 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 IL22Q9GZX6 179 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 DNPEPQ9ULA0 475 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 QSOX1O00391 747 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 GJB6O95452 261 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 CD86P42081 329 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 SYT12Q8IV01 421 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 FIG4Q92562 907 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 CATSPER2Q96P56 530 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 TLE6Q9H808 572 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 ZFYVE1Q9HBF4 777 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 RPRD1BQ9NQG5 326 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 FAM105AQ9NUU6 356 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 ZNHIT2Q9UHR6 403 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 ATP6V1HQ9UI12 483 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 LZTS1Q9Y250 596 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 IFNA16P05015 189 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 TM4SF1P30408 202 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 POM121L1PQ3SYA9 428 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 RIPOR1Q6ZS17 1223 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 CYP4X1Q8N118 509 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 NSMCE2Q96MF7 247 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 TSPAN18Q96SJ8 248 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 PAPOLBQ9NRJ5 636 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 GNPTGQ9UJJ9 305 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 HAO1Q9UJM8 370 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 A0A087X1B8 175 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 GLTPD2A6NH11 291 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 MEIS2O14770 477 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 LAG3P18627 525 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 SERPINB3P29508 390 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 C1DQ13901 141 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 FAM98BQ52LJ0 330 aaKnown RBP19.24■□□□□ 0.67
SMPD3-201ENST00000219334 PRMT9Q6P2P2 845 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM161BQ8NDZ6 487 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms