RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 NumbQ9QZS3 653 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Map7d3A2AEY4 876 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Plekha5E9Q6H8 1269 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zbtb11G5E8B9 1050 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Bub1O08901 1058 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Emilin3P59900 758 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Morf4l1P60762 362 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 UtyP79457 1212 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tmem130Q6NXM3 419 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cspg5Q71M36 566 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Znf385bQ8BXJ8 482 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Adprhl2Q8CG72 370 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 TwnkQ8CIW5 685 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Snapc1Q8K0S9 389 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Rps6kl1Q8R2S1 544 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Arhgef3Q91X46 524 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pcdha1Q91Y21 948 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tas1r3Q925D8 858 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 4921530L21RikQ9CQ47 274 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 MrgbpQ9DAT2 204 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Wfdc1Q9ESH5 211 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ppp2r3cQ9JK24 453 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 DgkeQ9R1C6 564 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 PcntP48725 2898 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Bclaf3A2AG58 752 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pex10B1AUE5 324 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Vmn2r44L7N2E1 861 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Eno3P21550 434 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Hsdl2Q2TPA8 490 aaKnown RBP11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fscn2Q32M02 492 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 ScinQ60604 715 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Xylt1Q811B1 953 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Aste1Q8BIR2 672 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 StgQ8BM15 349 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fam163bQ8BUM6 167 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zfp398Q8BV16 643 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dis3lQ8C0S1 1053 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Iqsec1Q8R0S2 961 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Lsm12Q9D0R8 195 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tdp2Q9JJX7 370 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Prg3Q9JL95 222 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dicer1Q8R418 1916 aa11.8□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Olfr1160A2AVT0 319 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 UprtB1AVZ0 310 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Olfr1354E9Q5G9 310 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Inpp5aE9QAS7 422 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 IhhP97812 411 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm1587Q3UT80 123 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fads6Q80UG1 342 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 LppQ8BFW7 613 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gabra5Q8BHJ7 463 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ppp6r2Q8R3Q2 923 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Asb7Q91ZU0 318 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Lysmd3Q99LE3 305 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm6657A0A1B0GRJ3 277 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zscan4bE9Q3G0 505 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm10719E9Q7T3 227 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pim1P06803 397 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dpy19l2P0CW70 773 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 AladP10518 330 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Atp6v0d1P51863 351 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cdh5P55284 784 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Usp46P62069 366 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Faf2Q3TDN2 445 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Brsk2Q69Z98 735 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Slc16a9Q7TM99 508 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zbtb5Q7TQG0 670 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Serpinb10Q8K1K6 397 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tbc1d13Q8R3D1 400 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Vangl2Q91ZD4 521 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Psip1Q99JF8 528 aaKnown RBP11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ttc30bQ9CY00 664 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Serbp1Q9CY58 407 aaKnown RBP11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Trim54Q9ERP3 366 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dnaja2Q9QYJ0 412 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gpc1Q9QZF2 557 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 RecqlQ9Z129 648 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gria4Q9Z2W8 902 aa11.79□□□□□ -0.52
Col9a1-202ENSMUST00000088349 4930469K13RikA0A286YDB2 92 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Wfdc16A2A5H4 111 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Spin2dB1B0R2 236 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm4302E9PX25 294 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ifi206G3UZV2 921 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Tmigd3G3X8R9 209 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Adcy1O88444 1118 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gnao1P18872 354 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Atp5bP56480 529 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 OsbpQ3B7Z2 805 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Srbd1Q497V5 1015 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Znf821Q6PD05 413 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Chst10Q6PGK7 356 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Paqr6Q6TCG5 343 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zpbp2Q6X786 326 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pqlc1Q80XM9 271 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Iars2Q8BIJ6 1012 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Suds3Q8BR65 328 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 PigwQ8C398 503 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ssh3Q8K330 649 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ero1bQ8R2E9 467 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Mrpl57Q9CQF8 102 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms