RNA–Protein interactions for RNA: ENSMUST00000078830.10

Rtn4-202, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 3,615 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-202ENSMUST00000078830 Top3bQ9Z321 862 aaKnown RBP12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Pcdh7A0A0A6YY83 1255 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Fam81bA0A140LI28 432 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Zfp985A2A7A5 519 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Gm20721E9Q2U8 318 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 DldO08749 509 aaKnown RBP12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ctbp1O88712 441 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 TubP50586 505 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ext2P70428 718 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Faf2Q3TDN2 445 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Grm5Q3UVX5 1203 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Olfr464Q5SW48 313 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Znf235Q61116 645 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Dnajc1Q61712 552 aaKnown RBP12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Dennd2cQ6P9P8 914 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Fbxw8Q8BIA4 598 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Slc45a1Q8BIV7 751 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Man2a2Q8BRK9 1152 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Pde10aQ8CA95 790 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 VasnQ9CZT5 673 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Kif12Q9D2Z8 642 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Dtwd1Q9D8U7 304 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Trhr2Q9ERT2 382 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 B4galt4Q9JJ04 344 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Brca1P48754 1812 aa12.35□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Vmn2r11E9Q4X4 861 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Gm8257E9Q8R3 264 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Mfsd4b4J3QNS5 503 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 ClgnP52194 611 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Pfkfb2P70265 519 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Echdc2Q3TLP5 296 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 GnasQ6R0H7 1133 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Q80Y73 168 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ddx42Q810A7 929 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Tbc1d10bQ8BHL3 798 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Rbm22Q8BHS3 420 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Gbp9Q8BTS3 619 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Znf276Q8CE64 614 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 CherpQ8CGZ0 936 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Q8CIL4 281 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Mrps2Q924T2 291 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Kat2bQ9JHD1 813 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ccdc22Q9JIG7 627 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Stap1Q9JM90 297 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 FancfE9Q5Z5 343 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Acot8P58137 320 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 YwhahP68510 246 aaKnown RBP12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 PrkcqQ02111 707 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Cd163Q2VLH6 1121 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Hbs1lQ69ZS7 682 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 ChpfQ6IQX7 774 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Cfap97Q6ZPR1 541 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Lyve1Q8BHC0 318 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Kank2Q8BX02 843 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Aph1bQ8C7N7 257 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Arhgap29Q8CGF1 1266 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Snrnp27Q8K194 155 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Slc36a1Q8K4D3 475 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Adgrg3Q8R0T6 542 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Lrrc34Q9DAM1 415 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 NfkbizQ9EST8 728 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 St6galnac4Q9R2B6 360 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Sept5Q9Z2Q6 369 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Slfn8B1ARD8 910 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Trim30bE9PVL6 203 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Vmn2r17E9PYF5 849 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 GnazO70443 355 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ccng1P51945 294 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Cyp2c38P56655 490 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ldb1P70662 411 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Ttc39bQ8BYY4 617 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Defb19Q8K3I8 83 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Caap1Q8VDY9 356 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 FtcdQ91XD4 541 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Trim7Q923T7 510 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Reep3Q99KK1 254 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Dlgap1Q9D415 992 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Subh2bvQ9D9Z7 123 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Shcbp1Q9Z179 668 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Pdpk1Q9Z2A0 559 aa12.34□□□□□ -0.43
Rtn4-202ENSMUST00000078830 Eno3P21550 434 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Cdh9P70407 786 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Olfr867Q7TRF3 331 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 NcaphQ8C156 731 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Usp3Q91W36 520 aaKnown RBP12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Psip1Q99JF8 528 aaKnown RBP12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Trem2Q99NH8 227 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Rwdd4Q9CPR1 188 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Nde1Q9CZA6 344 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 S100pbpQ9D5K4 396 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Lima1Q9ERG0 753 aaKnown RBP12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 RalbQ9JIW9 206 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Med20Q9R0X0 212 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Mtm1Q9Z2C5 603 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Prr14lE9Q7C4 1971 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Pcdh15Q99PJ1 1943 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Krt28A6BLY7 462 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 C6E9Q6D8 931 aa12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Dpysl2O08553 572 aaKnown RBP12.33□□□□□ -0.44
Rtn4-202ENSMUST00000078830 Foxm1O08696 760 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms