RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Anapc2Q8BZQ7 837 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Epn2Q8CHU3 595 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Plbd1Q8VCI0 550 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Csde1Q91W50 798 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sntg2Q925E0 539 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 GsdmcQ99NB5 468 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Acbd6Q9D061 282 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cdyl2Q9D5D8 503 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mbd1Q9Z2E2 636 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PtprvP70289 1705 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kndc1Q0KK55 1742 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pcna-ps2A0A140T8V5 261 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp985A2A7A5 519 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cylc2B1AWN8 422 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 FanceB8JJD6 213 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hk2O08528 917 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rgs2O08849 211 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tbc1d10aP58802 500 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zc3h15Q3TIV5 426 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 WhammQ571B6 793 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pde1aQ61481 565 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mef2dQ63943 514 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Abcg2Q7TMS5 657 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr867Q7TRF3 331 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc18a2Q8BRU6 517 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 AA792892Q8C6S1 278 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc15a5Q8CBB2 566 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sgsm3Q8VCZ6 750 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam192aQ91WE2 254 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mta3Q924K8 591 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ndufb5Q9CQH3 189 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam32aQ9CR80 112 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Alg13Q9D8C3 1166 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Maged1Q9QYH6 775 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Map3k6Q9WTR2 1291 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm4450E9Q007 373 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hes2O54792 157 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ifrd1P19182 449 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 RxraP28700 467 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Oaz1P54369 227 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2c37P56654 490 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cdh6P97326 790 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm1604bQ3TRG0 118 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Brms1lQ3U1T3 323 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hsd3b4Q61767 373 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zbtb44Q8R0A2 453 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr695Q8VFM3 315 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Q91Z58 1206 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 NgrnQ99KS2 293 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Znhit2Q9QY66 399 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Osbpl8B9EJ86 889 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TazI7HJS2 263 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 MrasO08989 208 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnfrsf11aO35305 625 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 ZfrO88532 1074 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 AfpP02772 605 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 LipeP54310 759 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 NogP97466 232 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam91a1Q3UVG3 837 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm5431Q5NCB3 844 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 DazlQ64368 298 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slain1Q68FF7 579 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam126aQ6P9N1 521 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccdc32Q8BS39 179 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Art3Q8R2G4 371 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Snx15Q91WE1 337 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Q9CPS8 106 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmem79Q9D709 391 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ift46Q9DB07 301 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ripk3Q9QZL0 486 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 1700064H15RikD3Z4D4 81 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ptpn9O35239 593 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Clk2O35491 499 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Snx3O70492 162 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2b10P12791 500 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Epb41P48193 858 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sash1P59808 1230 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nt5dc3Q3UHB1 546 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ksr1Q61097 873 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmem169Q8BG50 297 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Usp1Q8BJQ2 784 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rap2cQ8BU31 183 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Azin2Q8BVM4 459 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gucy1b2Q8BXH3 824 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Thop1Q8C1A5 687 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 CherpQ8CGZ0 936 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Wdr11Q8K1X1 1223 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cybrd1Q925G2 290 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pkp2Q9CQ73 795 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 IkbkeQ9R0T8 717 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ggt5Q9Z2A9 573 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr1123A2AT85 323 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TroapB7ZNG4 668 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tatdn2B7ZNL9 783 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r72D3Z4N8 856 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 C87414E9PWI7 475 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r7E9PYL5 915 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r3H3BJ88 915 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r6H3BK29 913 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn2r15L7N2A0 855 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms