RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 CDH4P55283 916 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 AMPD2Q01433 879 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 CBLBQ13191 982 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 HTR4Q13639 388 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 DPYSQ14117 519 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 PREPLQ4J6C6 727 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 ATP13A4Q4VNC1 1196 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 ANKRD20A8PQ5CZ79 823 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 PPP6R3Q5H9R7 873 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 RAP1GAP2Q684P5 730 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RNF43Q68DV7 783 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 NADSYN1Q6IA69 706 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 FBXL22Q6P050 247 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 ZNF783Q6ZMS7 281 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RFX8Q6ZV50 586 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 SETD3Q86TU7 594 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 CPNE8Q86YQ8 564 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 LRRC49Q8IUZ0 686 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 BBS7Q8IWZ6 715 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 ZNF683Q8IZ20 524 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RASGEF1CQ8N431 466 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 ACTRT1Q8TDG2 376 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RPRD1AQ96P16 312 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 CSPG4P5Q96PW8 444 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 RNF157Q96PX1 679 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 KCTD15Q96SI1 283 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 TRMT61BQ9BVS5 477 aaKnown RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 CALN1Q9BXU9 219 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 SLC2A11Q9BYW1 496 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 OSBPL8Q9BZF1 889 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 SMG9Q9H0W8 520 aaKnown RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 SPHK2Q9NRA0 654 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 DUS2Q9NX74 493 aaKnown RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 CWC15Q9P013 229 aaKnown RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 CDH22Q9UJ99 828 aa10.64□□□□□ -0.71
CASC19-247ENST00000641642 PACSIN2Q9UNF0 486 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 KIF26AQ9ULI4 1882 aaPredicted RBP10.64□□□□□ -0.71
CASC19-247ENST00000641642 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 C2CD4DB7Z1M9 353 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 LOC730098B7Z3J9 87 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 NCAM2O15394 837 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 CREB3O43889 395 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 SRGAP2O75044 1071 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 PENKP01210 267 aaPredicted RBP10.63□□□□□ -0.71
CASC19-247ENST00000641642 PYGMP11217 842 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 TGM2P21980 687 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 SLC6A4P31645 630 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 GJC1P36383 396 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 ETFBP38117 255 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 VIPR2P41587 438 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 MARCKSL1P49006 195 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 YBEYP58557 167 aaPredicted RBP10.63□□□□□ -0.71
CASC19-247ENST00000641642 GAD2Q05329 585 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 SLC12A1Q13621 1099 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 CA9Q16790 459 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 EML3Q32P44 896 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 SLC9A4Q6AI14 798 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 C1orf228Q6PIY5 440 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 PARM1Q6UWI2 310 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 MFSD7Q6UXD7 560 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 VITQ6UXI7 678 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 CCDC50Q8IVM0 306 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 ADHFE1Q8IWW8 467 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 LGI2Q8N0V4 545 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
CASC19-247ENST00000641642 FGF14Q92915 247 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 WBP2Q969T9 261 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 EXOC4Q96A65 974 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 BRD8Q9H0E9 1235 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 TMEM248Q9NWD8 314 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 GPATCH2LQ9NWQ4 482 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 XPO7Q9UIA9 1087 aaKnown RBP10.63□□□□□ -0.71
CASC19-247ENST00000641642 VANGL2Q9ULK5 521 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 SZT2Q5T011 3432 aa10.63□□□□□ -0.71
CASC19-247ENST00000641642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.62□□□□□ -0.71
CASC19-247ENST00000641642 FAM72CH0Y354 149 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 APOC4-APOC2K7ER74 178 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 APOL1O14791 398 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 DCLK1O15075 740 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 HOXC11O43248 304 aaPredicted RBP10.62□□□□□ -0.71
CASC19-247ENST00000641642 APOC2P02655 101 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 GLULP15104 373 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 GOT1P17174 413 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 ERCC2P18074 760 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 MX2P20592 715 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 EIF2DP41214 584 aaKnown RBP10.62□□□□□ -0.71
CASC19-247ENST00000641642 PAFAH1B1P43034 410 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 NDST2P52849 883 aa10.62□□□□□ -0.71
CASC19-247ENST00000641642 PFKPQ01813 784 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms