RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
PHGDH-213ENST00000641272 OR14C36Q8NHC7 312 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 RNF34Q969K3 372 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 FAM129BQ96TA1 746 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 CDC6Q99741 560 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 THAP9Q9H5L6 903 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 CCDC86Q9H6F5 360 aaKnown RBP17.24■□□□□ 0.35
PHGDH-213ENST00000641272 SCML1Q9UN30 329 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 FREM2Q5SZK8 3169 aa17.24■□□□□ 0.35
PHGDH-213ENST00000641272 DMXL2Q8TDJ6 3036 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 ADAMTS20P59510 1910 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 KCNU1A8MYU2 1149 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 CLDN6P56747 220 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 RACK1P63244 317 aaKnown RBP17.23■□□□□ 0.35
PHGDH-213ENST00000641272 NME3Q13232 169 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
PHGDH-213ENST00000641272 MEA1Q16626 185 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 BEND5Q7L4P6 421 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 ENOSF1Q7L5Y1 443 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 OR2T34Q8NGX1 318 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 STK32AQ8WU08 396 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 RPRD1AQ96P16 312 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-213ENST00000641272 MED15Q96RN5 788 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 PRMT1Q99873 361 aaKnown RBP17.23■□□□□ 0.35
PHGDH-213ENST00000641272 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 FTSJ1Q9UET6 329 aa17.23■□□□□ 0.35
PHGDH-213ENST00000641272 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-213ENST00000641272 A0A1B0GVM2 712 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 TARSL2A2RTX5 802 aaKnown RBP17.22■□□□□ 0.35
PHGDH-213ENST00000641272 TCAF2A6NFQ2 919 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 BNIP3LO60238 219 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 ADH1BP00325 375 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 ERBB2P04626 1255 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 ABCB4P21439 1286 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 CDK17Q00537 523 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 RABGAP1LQ5R372 815 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
PHGDH-213ENST00000641272 DHRS13Q6UX07 377 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 GBP6Q6ZN66 633 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 DBX2Q6ZNG2 339 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 OR52K2Q8NGK3 314 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 SLC2A13Q96QE2 648 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 APEX2Q9UBZ4 518 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 ADAMTS1Q9UHI8 967 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 FZD4Q9ULV1 537 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 RAXQ9Y2V3 346 aa17.22■□□□□ 0.35
PHGDH-213ENST00000641272 A0A1B0GTQ1 180 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 VILLO15195 856 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 TNFSF14O43557 240 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 HSF2BPO75031 334 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 RTN2O75298 545 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 DAB1O75553 588 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 MAT2AP31153 395 aaKnown RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 DRD3P35462 400 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 ELAVL3Q14576 367 aaKnown RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 PTPN20Q4JDL3 420 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 OTUD1Q5VV17 481 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 FBXL22Q6P050 247 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 Q6ZVU0 165 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.351e-7■■■□□ 16.7
PHGDH-213ENST00000641272 TMPRSS7Q7RTY8 843 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 WDTC1Q8N5D0 677 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 SERAC1Q96JX3 654 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 ELF4Q99607 663 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
PHGDH-213ENST00000641272 COL5A1P20908 1838 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-213ENST00000641272 DOCK9Q9BZ29 2069 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 APC2O95996 2303 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 PCDHGA12O60330 932 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 DKK1O94907 266 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 GOT1P17174 413 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 C5AR1P21730 350 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 CD38P28907 300 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 CCR1P32246 355 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 NNMTP40261 264 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SFSWAPQ12872 951 aaKnown RBP17.2■□□□□ 0.34
PHGDH-213ENST00000641272 EIF4EBP2Q13542 120 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SHBQ15464 509 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 INAVAQ3KP66 663 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 ACCSLQ4AC99 568 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 TTC39BQ5VTQ0 682 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-213ENST00000641272 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 OLFML1Q6UWY5 402 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 C14orf80Q86SX3 495 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 FRS2Q8WU20 508 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 OR8D1Q8WZ84 308 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SHC3Q92529 594 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms