RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	MATN1	P21941	496 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	GNLY	P22749	145 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	RBL1	P28749	1068 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	TNFSF8	P32971	234 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	THPO	P40225	353 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	PTDSS1	P48651	473 aa	Known RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	CTBP1	Q13363	440 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	GALNT3	Q14435	633 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	METTL7B	Q6UX53	244 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZDHHC24	Q6UX98	284 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	IGFL3	Q6UXB1	125 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	KYAT3	Q6YP21	454 aa	Known RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	DMBX1	Q8NFW5	382 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	OR52N4	Q8NGI2	321 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF653	Q96CK0	615 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF668	Q96K58	619 aa	Predicted RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	C17orf77	Q96MU5	243 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	GPR78	Q96P69	363 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	HIST1H2AA	Q96QV6	131 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	P2RX7	Q99572	595 aa	Known RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	OPRPN	Q99935	248 aa	Predicted RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	CABLES2	Q9BTV7	478 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	ABHD14A	Q9BUJ0	271 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	UNK	Q9C0B0	810 aa	Known RBP	0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959	FANCL	Q9NW38	375 aa		0.9	□□□□□ -2.27
LMBR1-222	ENST00000638959		A0A0U1RQJ8	604 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959		H7C423	109 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959		H7C4K7	107 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	MSI1	O43347	362 aa	Known RBP	0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	ITM2A	O43736	263 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	TCEA3	O75764	348 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	WDR47	O94967	919 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	IGKV3-15	P01624	115 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	SRC	P12931	536 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	SLC16A2	P36021	539 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	AVPR1A	P37288	418 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	PPP3CC	P48454	512 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	AGTR2	P50052	363 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	NKX6-1	P78426	367 aa	Predicted RBP	0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	CAPRIN1	Q14444	709 aa	Known RBP	0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	CLCA4	Q14CN2	919 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	FAAP20	Q6NZ36	180 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	LCTL	Q6UWM7	567 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF783	Q6ZMS7	281 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	DDX42	Q86XP3	938 aa	Known RBP eCLIP	0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	LMNTD2	Q8IXW0	634 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	FAM185A	Q8N0U4	392 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF441	Q8N8Z8	693 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	LRRC57	Q8N9N7	239 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	OR10V1	Q8NGI7	309 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	KLHL29	Q96CT2	875 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	TEKT5	Q96M29	485 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	KLHL31	Q9H511	634 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	XPNPEP3	Q9NQH7	507 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZNF711	Q9Y462	761 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	SLC4A4	Q9Y6R1	1079 aa		0.89	□□□□□ -2.27
LMBR1-222	ENST00000638959	LOC102723971	A0A1B0GUV8	181 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MBD3L4	A6NDZ8	208 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MBD3L3	A6NE82	208 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MBD3L5	A6NJ08	208 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	NR5A2	O00482	541 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	AP1G1	O43747	822 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	PMS2P2	O95744	297 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	IGLV1-44	P01699	117 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	RFPL3S	P0C7P2	107 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	IGHMBP2	P38935	993 aa	Known RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MXI1	P50539	228 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	DGKQ	P52824	942 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	COPA	P53621	1224 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZBTB17	Q13105	803 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	RAB32	Q13637	225 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	CALCRL	Q16602	461 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	SYT16	Q17RD7	645 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	TYW3	Q6IPR3	259 aa	Known RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MON1B	Q7L1V2	547 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	NOTCH2NL	Q7Z3S9	236 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	SLC9B2	Q86UD5	537 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	SPATS2	Q86XZ4	545 aa	Known RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	PGBD5	Q8N414	524 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	DPP10	Q8N608	796 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	C1orf162	Q8NEQ5	155 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	RFWD2	Q8NHY2	731 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	NPIPB3	Q92617	1050 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MTFMT	Q96DP5	389 aa	Known RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	LRR1	Q96L50	414 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	FOXN4	Q96NZ1	517 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	TRIM51	Q9BSJ1	452 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	ZCWPW1	Q9H0M4	648 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	ERVMER34-1	Q9H9K5	563 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	LRRC4	Q9HBW1	653 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	DKK4	Q9UBT3	224 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	CSAG2	Q9Y5P2	127 aa		0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	0.88	□□□□□ -2.27
LMBR1-222	ENST00000638959	GREB1L	Q9C091	1923 aa	Predicted RBP	0.87	□□□□□ -2.27
LMBR1-222	ENST00000638959		E9PQ18	207 aa		0.87	□□□□□ -2.27
LMBR1-222	ENST00000638959		K7ESF4	209 aa		0.87	□□□□□ -2.27
LMBR1-222	ENST00000638959	BTN3A1	O00481	513 aa		0.87	□□□□□ -2.27

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