RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CCDC160A6NGH7 325 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ASLP04424 464 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ATP6V1B1P15313 513 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RGS2P41220 211 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 MAGEA12P43365 314 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 PHKA2P46019 1235 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RPL5P46777 297 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 SERPINB8P50452 374 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ADGRE1Q14246 886 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 FLOT2Q14254 428 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 TBC1D25Q3MII6 688 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LBX2Q6XYB7 198 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CCNYQ8ND76 341 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 USP13Q92995 863 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LRGUKQ96M69 825 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 AGAP3Q96P47 875 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 COPS7BQ9H9Q2 264 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 HES2Q9Y543 173 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CFLARO15519 480 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 TRIM13O60858 407 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 C22orf31O95567 290 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ADORA2BP29275 332 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 EPHA3P29320 983 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 NUMBP49757 651 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LIMK2P53671 638 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 INHBCP55103 352 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 BNC2Q6ZN30 1099 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LILRA2Q8N149 483 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ACVR1CQ8NER5 493 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ISL2Q96A47 359 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RCN3Q96D15 328 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 MAF1Q9H063 256 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 IRAK4Q9NWZ3 460 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 PTTG2Q9NZH5 202 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RIMS3Q9UJD0 308 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 PRPF19Q9UMS4 504 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 SCN1AP35498 2009 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 VTNP04004 478 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 PGK2P07205 417 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 THRAP10827 490 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 CCDC130P13994 396 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 SPRP35270 261 aaPredicted RBP11.15□□□□□ -0.62
SNIP1-204ENST00000638725 PGGT1BP53609 377 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 SH3BGRP55822 239 aaPredicted RBP11.15□□□□□ -0.62
SNIP1-204ENST00000638725 MYBPC1Q00872 1141 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 MS4A2Q01362 244 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 CEACAM7Q14002 265 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF423Q2M1K9 1284 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 SPANXN3Q5MJ09 141 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 METTL21CQ5VZV1 264 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 IYDQ6PHW0 289 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 KLHDC10Q6PID8 442 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 RIOX2Q8IUF8 465 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 KYQ8NBH2 561 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 KLRG1Q96E93 195 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 SERPINI1Q99574 410 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 FERMT1Q9BQL6 677 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 Q9H521 79 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 PHF24Q9UPV7 400 aa11.15□□□□□ -0.62
SNIP1-204ENST00000638725 SYNJ2BP-COX16A0A087WUM0 186 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 RGSL1A5PLK6 1076 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 KPNA7A9QM74 516 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM114B3SHH9 223 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 STX16-NPEPL1H3BU86 382 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 KCNK1O00180 336 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 HBP1O60381 514 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 C2P06681 752 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 SRGAP2BP0DMP2 458 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 ENO3P13929 434 aaPredicted RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 DPP6P42658 865 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 PITX1P78337 314 aaPredicted RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 IFRD2Q12894 506 aaPredicted RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 ITGA7Q13683 1181 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 C6orf52Q5T4I8 152 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM198Q66K66 360 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 PID1Q7Z2X4 250 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 CLEC14AQ86T13 490 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 ZDHHC17Q8IUH5 632 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 FBXO16Q8IX29 292 aaPredicted RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 GALNT4Q8N4A0 578 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 TTC39CQ8N584 583 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.63
SNIP1-204ENST00000638725 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.63
SNIP1-204ENST00000638725 URGCPQ8TCY9 931 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms