RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CLK1P49759 484 aaKnown RBP16.96■□□□□ 0.31
SCARB2-210ENST00000638567 SCARA3Q6AZY7 606 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 TAGAPQ8N103 731 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 FNIP1Q8TF40 1166 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 SNX15Q9NRS6 342 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 SYBUQ9NX95 663 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 ANKRD6Q9Y2G4 727 aa16.96■□□□□ 0.31
SCARB2-210ENST00000638567 CXCL11O14625 94 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 RENBPP51606 427 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PPIDQ08752 370 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 TAF5Q15542 800 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 KHDC1Q4VXA5 237 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 DDHD1Q8NEL9 900 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 COG4Q9H9E3 785 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ARHGEF3Q9NR81 526 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PAIP2BQ9ULR5 123 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 SLC12A8A0AV02 714 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 FARP2O94887 1054 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 GDF10P55107 478 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 P2RY11Q96G91 374 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 TBL1YQ9BQ87 522 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 SLC25A23Q9BV35 468 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 DHX33Q9H6R0 707 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 CRLS1Q9UJA2 301 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 NDUFAF1Q9Y375 327 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 B4GALT4O60513 344 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 DDNO94850 711 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 UPP2O95045 317 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ATP6V1B2P21281 511 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 TRPC1P48995 793 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PDK3Q15120 406 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 OVOS1Q6IE37 1185 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 KCTD4Q8WVF5 259 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PSMD12O00232 456 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 CLOCKO15516 846 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 PAPSS1O43252 624 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 MSX2P35548 267 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 NUP107P57740 925 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 SAMD4BQ5PRF9 694 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 P3H2Q8IVL5 708 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 OR9Q1Q8NGQ5 310 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 NTPCRQ9BSD7 190 aaKnown RBP16.95■□□□□ 0.3
SCARB2-210ENST00000638567 ELOVL4Q9GZR5 314 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 CRYL1Q9Y2S2 319 aa16.95■□□□□ 0.3
SCARB2-210ENST00000638567 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SPTLC1O15269 473 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 ZSCAN9O15535 394 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 NPR3P17342 541 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 CHN2P52757 468 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SLC44A4Q53GD3 710 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 MARK2Q7KZI7 788 aaKnown RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 TTC7BQ86TV6 843 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SLC41A1Q8IVJ1 513 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 ZFRQ96KR1 1074 aaKnown RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 PPP1R10Q96QC0 940 aaKnown RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SCN3BQ9NY72 215 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 EME2A4GXA9 379 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 F5H5T6 163 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 GPR182O15218 404 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 APOA1P02647 267 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 SCNN1BP51168 640 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 NR6A1Q15406 480 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 TTC23LQ6PF05 361 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 VTA1Q9NP79 307 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 LMCD1Q9NZU5 365 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 MYH8P13535 1937 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 RGSL1A5PLK6 1076 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 IRF6O14896 467 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 BDNFP23560 247 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 GSTA3Q16772 222 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 LRRC8BQ6P9F7 803 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 CLVS1Q8IUQ0 354 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-210ENST00000638567 RCN3Q96D15 328 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 GAD1Q99259 594 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 CAB39LQ9H9S4 337 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 MYRFQ9Y2G1 1151 aa16.94■□□□□ 0.3
SCARB2-210ENST00000638567 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-210ENST00000638567 PLSCR1O15162 318 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 ZNF177Q13360 481 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-210ENST00000638567 SNX17Q15036 470 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 C6orf89Q6UWU4 347 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 PLPPR4Q7Z2D5 763 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 SPATA6LQ8N4H0 392 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
SCARB2-210ENST00000638567 CADM1Q9BY67 442 aaKnown RBP16.93■□□□□ 0.3
SCARB2-210ENST00000638567 EIF3LQ9Y262 564 aaKnown RBP16.93■□□□□ 0.3
SCARB2-210ENST00000638567 CLUHO75153 1309 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms