RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MGAT5Q09328 741 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 TAF10Q12962 218 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 TCEAL1Q15170 157 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 KYNUQ16719 465 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 PTPRNQ16849 979 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 FAM83EQ2M2I3 478 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 SYTL3Q4VX76 610 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 ATAT1Q5SQI0 421 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 PTRHD1Q6GMV3 140 aaKnown RBP5.65□□□□□ -1.51
CHD2-227ENST00000637572 RASGEF1CQ8N431 466 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 CASKIN2Q8WXE0 1202 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 ANKRD7Q92527 254 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 KAT2BQ92831 832 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 TTC17Q96AE7 1141 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 RIPOR3Q96MK2 946 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 ZBTB18Q99592 522 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 C1QTNF7Q9BXJ2 289 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 MFSD1Q9H3U5 465 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 PTPRHQ9HD43 1115 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 NT5MQ9NPB1 228 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 MRPL40Q9NQ50 206 aaKnown RBP5.65□□□□□ -1.51
CHD2-227ENST00000637572 ZNF212Q9UDV6 495 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 VANGL2Q9ULK5 521 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 ENPP3O14638 875 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 TBC1D4O60343 1298 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 VCLP18206 1134 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PGAM1P18669 254 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 GABRR2P28476 465 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 GPD2P43304 727 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 DNAJC3Q13217 504 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 GPR17Q13304 367 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 TRIP4Q15650 581 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 ZSCAN26Q16670 478 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 DDR2Q16832 855 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 C15orf59Q2T9L4 293 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 MMEL1Q495T6 779 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 C16orf46Q6P387 395 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 TAS1R3Q7RTX0 852 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SLC26A11Q86WA9 606 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 CIPCQ9C0C6 399 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 IL22Q9GZX6 179 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 IL23AQ9NPF7 189 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ACP6Q9NPH0 428 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 APOBEC2Q9Y235 224 aaKnown RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 LRRC37AA6NMS7 1700 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 LIASO43766 372 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 NFATC1O95644 943 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 JUNDP17535 347 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 CDH5P33151 784 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 RPL7AP62424 266 aaKnown RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 BCL2L1Q07817 233 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 AGAP9Q5VTM2 703 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PDPK2PQ6A1A2 396 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 CRELD2Q6UXH1 353 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 STK40Q8N2I9 435 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ZCCHC9Q8N567 271 aaKnown RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 SLC25A41Q8N5S1 370 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 MYLIPQ8WY64 445 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ZBTB10Q96DT7 871 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SCLYQ96I15 445 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 RAD9AQ99638 391 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 EGFL8Q99944 293 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SUN2Q9UH99 717 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 DCDC2Q9UHG0 476 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 RP1L1Q8IWN7 2480 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 SDK1Q7Z5N4 2213 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 C2CD4BA6NLJ0 364 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 NT5C1B-RDH14C9J2C7 533 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 H3BMM5 538 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 CLDN5O00501 218 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 IRAK2O43187 625 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 GLRA3O75311 464 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 VPS26AO75436 327 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SOD2P04179 222 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 RB1P06400 928 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ERCC2P18074 760 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SERPINB8P50452 374 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PHEXP78562 749 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 SLC20A2Q08357 652 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 MPP3Q13368 585 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 TSTA3Q13630 321 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 DPYSL3Q14195 570 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ASTE1Q2TB18 679 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 ARMC12Q5T9G4 340 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PMF1Q6P1K2 205 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PGBD3Q8N328 593 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ALLCQ8N6M5 410 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 ATAD1Q8NBU5 361 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 FBXO36Q8NEA4 188 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 FBXO25Q8TCJ0 367 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 FCRL2Q96LA5 508 aaPredicted RBP5.64□□□□□ -1.51
CHD2-227ENST00000637572 HAPLN3Q96S86 360 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 PCDH18Q9HCL0 1135 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 GDF3Q9NR23 364 aa5.64□□□□□ -1.51
CHD2-227ENST00000637572 NDE1Q9NXR1 346 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms