RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 STAT1P42224 750 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 CXCR3P49682 368 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 AFF3P51826 1226 aaKnown RBP19.52■□□□□ 0.72
CLN6-221ENST00000637494 PLK1P53350 603 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 COPB1P53618 953 aaKnown RBP19.52■□□□□ 0.72
CLN6-221ENST00000637494 CDH4P55283 916 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 CENPCQ03188 943 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 GRIK2Q13002 908 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 SYCP1Q15431 976 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 CCDC183Q5T5S1 534 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 C9orf64Q5T6V5 341 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 NAA35Q5VZE5 725 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 DSG4Q86SJ6 1040 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 MMAAQ8IVH4 418 aaKnown RBP19.52■□□□□ 0.72
CLN6-221ENST00000637494 NEK11Q8NG66 645 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 EPS8L1Q8TE68 723 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 CPA5Q8WXQ8 436 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 IGSF8Q969P0 613 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 MUC3BQ9H195 1237 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 NLRC4Q9NPP4 1024 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 SLCO3A1Q9UIG8 710 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 VPS28Q9UK41 221 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.52■□□□□ 0.72
CLN6-221ENST00000637494 PCDHB9Q9Y5E1 797 aa19.52■□□□□ 0.72
CLN6-221ENST00000637494 LRRC72A6NJI9 287 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 RNASEH2AO75792 299 aaKnown RBP19.51■□□□□ 0.71
CLN6-221ENST00000637494 ZNF18P17022 549 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 SLC8A1P32418 973 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 NOMO3P69849 1222 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 KRT83P78385 493 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 SHC2P98077 582 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 CDR2Q01850 454 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 FOXC1Q12948 553 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 ELAVL3Q14576 367 aaKnown RBP19.51■□□□□ 0.71
CLN6-221ENST00000637494 ACCSLQ4AC99 568 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 TRIM72Q6ZMU5 477 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 OR2I1PQ8NGU4 316 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 TBCBQ99426 244 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 NAT10Q9H0A0 1025 aaKnown RBP19.51■□□□□ 0.71
CLN6-221ENST00000637494 ARHGEF38Q9NXL2 777 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 FZD4Q9ULV1 537 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 ADAMTS9Q9P2N4 1935 aa19.51■□□□□ 0.71
CLN6-221ENST00000637494 FAM170AA1A519 330 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 FAM47DPA6NHR8 397 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 MID1O15344 667 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 ADCY5O95622 1261 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 IL1BP01584 269 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 RHOCP08134 193 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 C5AR1P21730 350 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 CD27P26842 260 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 PI4KAP42356 2102 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 PSMD8P48556 350 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 STK19P49842 368 aaPredicted RBP19.5■□□□□ 0.71
CLN6-221ENST00000637494 UBXN1Q04323 297 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 CXorf57Q6NSI4 855 aaKnown RBP19.5■□□□□ 0.71
CLN6-221ENST00000637494 ADAT2Q7Z6V5 191 aaKnown RBP19.5■□□□□ 0.71
CLN6-221ENST00000637494 PIP4P1Q86T03 277 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 OR8D1Q8WZ84 308 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 NT5C3BQ969T7 300 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 BIRC7Q96CA5 298 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 FEM1AQ9BSK4 669 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 OSGEPQ9NPF4 335 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 LIMA1Q9UHB6 759 aaKnown RBP19.5■□□□□ 0.71
CLN6-221ENST00000637494 FARP1Q9Y4F1 1045 aaPredicted RBP19.5■□□□□ 0.71
CLN6-221ENST00000637494 PCDH15Q96QU1 1955 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 NCOR2Q9Y618 2525 aa19.5■□□□□ 0.71
CLN6-221ENST00000637494 A0A1W2PP55 124 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 GGCXP38435 758 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 KLK7P49862 253 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 VASPP50552 380 aaPredicted RBP19.49■□□□□ 0.71
CLN6-221ENST00000637494 C5orf22Q49AR2 442 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 FAM46CQ5VWP2 391 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 KIAA0895LQ68EN5 471 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 ARCQ7LC44 396 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 SKA1Q96BD8 255 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 C1orf74Q96LT6 269 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 CCDC114Q96M63 670 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 C2orf49Q9BVC5 232 aaPredicted RBP19.49■□□□□ 0.71
CLN6-221ENST00000637494 GAREM1Q9H706 876 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 ADAMTS1Q9UHI8 967 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 NOCTQ9UK39 431 aaKnown RBP19.49■□□□□ 0.71
CLN6-221ENST00000637494 TPX2Q9ULW0 747 aaKnown RBP19.49■□□□□ 0.71
CLN6-221ENST00000637494 TBC1D30Q9Y2I9 924 aa19.49■□□□□ 0.71
CLN6-221ENST00000637494 LGALS16A8MUM7 142 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 CD59P13987 128 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 GOT1P17174 413 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 FLT3P36888 993 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 NSFP46459 744 aaKnown RBP19.48■□□□□ 0.71
CLN6-221ENST00000637494 CSNK1EP49674 416 aaKnown RBP19.48■□□□□ 0.71
CLN6-221ENST00000637494 NUMBP49757 651 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 JAM2P57087 298 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 SIM1P81133 766 aaPredicted RBP19.48■□□□□ 0.71
CLN6-221ENST00000637494 ARL13BQ3SXY8 428 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 C2CD6Q53TS8 623 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 C6orf118Q5T5N4 469 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 OTUD1Q5VV17 481 aaPredicted RBP19.48■□□□□ 0.71
CLN6-221ENST00000637494 C14orf80Q86SX3 495 aa19.48■□□□□ 0.71
CLN6-221ENST00000637494 SETD3Q86TU7 594 aaPredicted RBP19.48■□□□□ 0.71
CLN6-221ENST00000637494 OR2T34Q8NGX1 318 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms