RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 DYNC1LI2O43237 492 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 JUNP05412 331 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 ITGAXP20702 1163 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 LAMC2Q13753 1193 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 PDCD2Q16342 344 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 ZNF280DQ6N043 979 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 LRRC8BQ6P9F7 803 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 NPWQ8N729 165 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 ANKRD27Q96NW4 1050 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 APBA2Q99767 749 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 TASP1Q9H6P5 420 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 FZD10Q9ULW2 581 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 POMPQ9Y244 141 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 PPP1R12AO14974 1030 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 JCHAINP01591 159 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 USP17L7P0C7H9 530 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 NCAM1P13591 858 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 GRM5P41594 1212 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 MATKP42679 507 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 ARCQ7LC44 396 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 OTOP3Q7RTS5 596 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 ERO1BQ86YB8 467 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 SPATA22Q8NHS9 363 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 CATSPER2Q96P56 530 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 DCDC2Q9UHG0 476 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 PCDHGB4Q9UN71 923 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 YJEFN3A6XGL0 299 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 HUS1O60921 280 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 C2P06681 752 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 ENO3P13929 434 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 ZFXP17010 805 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 GP5P40197 560 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 MAGEA6P43360 314 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 PTPN9P43378 593 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 NR2C2P49116 596 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 TKTL1P51854 596 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 NAGLUP54802 743 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 SNX32Q86XE0 403 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 SNX27Q96L92 541 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 USP3Q9Y6I4 520 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 AOC1P19801 751 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 NFKB1P19838 968 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 NMBRP28336 390 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 MRPS22P82650 360 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 CTBP1Q13363 440 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 OTUD1Q5VV17 481 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 RWDD4Q6NW29 188 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC27A1Q6PCB7 646 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 MARK2Q7KZI7 788 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 GPRIN1Q7Z2K8 1008 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 TDRD5Q8NAT2 981 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 OR6Y1Q8NGX8 325 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 RNF34Q969K3 372 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 OLFM3Q96PB7 478 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 DDIT4Q9NX09 232 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
CACNA1A-228ENST00000636610 OR6B1O95007 311 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 COX4I1P13073 169 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 SMPD1P17405 629 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 IRX1P78414 480 aaPredicted RBP14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 ZBTB17Q13105 803 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 POU6F1Q14863 301 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 MAMDC4Q6UXC1 1216 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 GALNT4Q8N4A0 578 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 B3GALNT2Q8NCR0 500 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 BFARQ9NZS9 450 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 MORF4L1Q9UBU8 362 aa14.33□□□□□ -0.11
CACNA1A-228ENST00000636610 F8W8V4 182 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 MT-CYBP00156 380 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 MX2P20592 715 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 PTPN3P26045 913 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 FDFT1P37268 417 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 TPI1P60174 286 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 LBRQ14739 615 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 SLC25A52Q3SY17 297 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 MMEL1Q495T6 779 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 ZSCAN18Q8TBC5 510 aaPredicted RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 TMEM30AQ9NV96 361 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 BUD23O43709 281 aaKnown RBP14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 KLHL2O95198 593 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 GK3PQ14409 553 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 GRM3Q14832 879 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 PAOXQ6QHF9 649 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 ARHGAP36Q6ZRI8 547 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 DENND6AQ8IWF6 608 aa14.33□□□□□ -0.12
CACNA1A-228ENST00000636610 OR6J1Q8NGC5 347 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms