RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 DNAAF2Q9NVR5 837 aaKnown RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 INTS6Q9UL03 887 aaKnown RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 NYNRINQ9P2P1 1898 aaKnown RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 FREM2Q5SZK8 3169 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 A0A1B0GVM2 712 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 TCAF2A6NFQ2 919 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 SH3BP5O60239 455 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 ATP1A3P13637 1013 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 FMO1Q01740 532 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 TRIP6Q15654 476 aaKnown RBP18.96■□□□□ 0.63
CLN6-214ENST00000636314 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
CLN6-214ENST00000636314 RAB44Q7Z6P3 723 aaPredicted RBP18.96■□□□□ 0.63
CLN6-214ENST00000636314 CCAR2Q8N163 923 aaKnown RBP18.96■□□□□ 0.63
CLN6-214ENST00000636314 TTC17Q96AE7 1141 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 RPRD1AQ96P16 312 aaPredicted RBP18.96■□□□□ 0.63
CLN6-214ENST00000636314 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 ITM2CQ9NQX7 267 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 PAXBP1Q9Y5B6 917 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 HS3ST4Q9Y661 456 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 PLXNB3Q9ULL4 1909 aa18.96■□□□□ 0.63
CLN6-214ENST00000636314 SMTNL1A8MU46 457 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 PAGE1O75459 146 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 CYP1A1P04798 512 aaPredicted RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 TFE3P19532 575 aaPredicted RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 GGCXP38435 758 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 TPMTP51580 245 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 CENPCQ03188 943 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 DEUP1Q05D60 604 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 AUHQ13825 339 aaKnown RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 SLC25A52Q3SY17 297 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 BRMS1LQ5PSV4 323 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 SYCP2LQ5T4T6 812 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 RNF219Q5W0B1 726 aaPredicted RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 FBXL22Q6P050 247 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 PGAP3Q96FM1 320 aaPredicted RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 TOE1Q96GM8 510 aaKnown RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 TBCBQ99426 244 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 WDCPQ9H6R7 721 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 SUSD2Q9UGT4 822 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 SUN2Q9UH99 717 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 VANGL2Q9ULK5 521 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 ITPR1Q14643 2758 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 PTPRBP23467 1997 aa18.95■□□□□ 0.62
CLN6-214ENST00000636314 ANKRD11Q6UB99 2663 aaPredicted RBP18.95■□□□□ 0.62
CLN6-214ENST00000636314 FAM221BA6H8Z2 402 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 TAF4O00268 1085 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 F9P00740 461 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 GNSP15586 552 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 CHRNB2P17787 502 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 OXTRP30559 389 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 FLT3P36888 993 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 CXCR3P49682 368 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 SLC12A1Q13621 1099 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 PROSER1Q86XN7 944 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 FOXJ1Q92949 421 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 NT5C3BQ969T7 300 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 MYO19Q96H55 970 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 ZNF419Q96HQ0 510 aaPredicted RBP18.94■□□□□ 0.62
CLN6-214ENST00000636314 C11orf70Q9BRQ4 267 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 TKTL2Q9H0I9 626 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 SIK2Q9H0K1 926 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 PRSS16Q9NQE7 514 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 METTL5Q9NRN9 209 aaKnown RBP18.94■□□□□ 0.62
CLN6-214ENST00000636314 TMEM51Q9NW97 253 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 WSB2Q9NYS7 404 aaPredicted RBP18.94■□□□□ 0.62
CLN6-214ENST00000636314 ERVW-1Q9UQF0 538 aa18.94■□□□□ 0.62
CLN6-214ENST00000636314 MEI4A8MW99 385 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 IGLV3-19P01714 112 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 SRPRAP08240 638 aaKnown RBP18.93■□□□□ 0.62
CLN6-214ENST00000636314 FTH1P19P0C7X4 201 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 PDGFRAP16234 1089 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 MMP8P22894 467 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 MAOBP27338 520 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 CTSOP43234 321 aaPredicted RBP18.93■□□□□ 0.62
CLN6-214ENST00000636314 OXCT1P55809 520 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 SCAPQ12770 1279 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 SLC14A1Q13336 389 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 WDR45BQ5MNZ6 344 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 ZNF776Q68DI1 518 aaPredicted RBP18.93■□□□□ 0.62
CLN6-214ENST00000636314 NAXDQ8IW45 347 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 DHX40Q8IX18 779 aaKnown RBP18.93■□□□□ 0.62
CLN6-214ENST00000636314 APCDD1Q8J025 514 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 KDM1BQ8NB78 822 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 IGSF8Q969P0 613 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 MRGPRX3Q96LB0 322 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 GPR174Q9BXC1 333 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 SEPT11Q9NVA2 429 aaKnown RBP18.93■□□□□ 0.62
CLN6-214ENST00000636314 ARHGEF38Q9NXL2 777 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 TMEM59LQ9UK28 342 aa18.93■□□□□ 0.62
CLN6-214ENST00000636314 ADCY5O95622 1261 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 DNTTP04053 509 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 NSFP46459 744 aaKnown RBP18.92■□□□□ 0.62
CLN6-214ENST00000636314 ZNF165P49910 485 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 IRAK1P51617 712 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 ECT2LQ008S8 904 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 ZBTB16Q05516 673 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 GRIK2Q13002 908 aa18.92■□□□□ 0.62
CLN6-214ENST00000636314 HNRNPA1L2Q32P51 320 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms