RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PCDH9Q9HC56 1237 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 MTO1Q9Y2Z2 717 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 F8VP50 259 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 BEST1O76090 585 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 SLC34A2O95436 690 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 IL1BP01584 269 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 CD19P15391 556 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 GM2AP17900 193 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 GRIK1P39086 918 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 ARSEP51690 589 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 TAS2R40P59535 323 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 KRT72Q14CN4 511 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 SMAD2Q15796 467 aaKnown RBP15.92■□□□□ 0.14
CLN8-209ENST00000635970 ATAT1Q5SQI0 421 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 RNASEH2BQ5TBB1 312 aaKnown RBP15.92■□□□□ 0.14
CLN8-209ENST00000635970 TRIM68Q6AZZ1 485 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 ZNF449Q6P9G9 518 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 LVRNQ6Q4G3 990 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 ADGRD1Q6QNK2 874 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 RTL10Q7L3V2 364 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 HS6ST3Q8IZP7 471 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 ARHGAP24Q8N264 748 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 RIPOR3Q96MK2 946 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 ASB2Q96Q27 587 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 KCNK16Q96T55 309 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 FAM167BQ9BTA0 163 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 TRIM55Q9BYV6 548 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 DDX56Q9NY93 547 aaKnown RBP15.92■□□□□ 0.14
CLN8-209ENST00000635970 GRID1Q9ULK0 1009 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 EFR3BQ9Y2G0 817 aa15.92■□□□□ 0.14
CLN8-209ENST00000635970 DOCK8Q8NF50 2099 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 NVLO15381 856 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 MAGEA11P43364 429 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZNF132P52740 706 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 EPHB3P54753 998 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 NOMO3P69849 1222 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 GPS1Q13098 491 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 PLD1Q13393 1074 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 RBBP5Q15291 538 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 AAK1Q2M2I8 961 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 SLC5A9Q2M3M2 681 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 FAM91A1Q658Y4 838 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 NSL1Q96IY1 281 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 TSC22D3Q99576 134 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 DHRS4Q9BTZ2 278 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 CLUHO75153 1309 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 DPPA5A6NC42 116 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 AP1G2O75843 785 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 RHOP08100 348 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 KRT4P19013 534 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 MTHFRP42898 656 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 VCPP55072 806 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 MXRA7P84157 204 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 CCDC6Q16204 474 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 SLC30A9Q6PML9 568 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 MFN1Q8IWA4 741 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZBED8Q8IZ13 594 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 C4orf33Q8N1A6 199 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ELMOD1Q8N336 334 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ATP11CQ8NB49 1132 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZMIZ2Q8NF64 920 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZFAND2BQ8WV99 257 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 TFAP2BQ92481 460 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 PSMG2Q969U7 264 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 SMARCD1Q96GM5 515 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZNF512Q96ME7 567 aaPredicted RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 SLITRK1Q96PX8 696 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 SMOQ99835 787 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 ZNF334Q9HCZ1 680 aaPredicted RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 WDR6Q9NNW5 1121 aaKnown RBP15.91■□□□□ 0.14
CLN8-209ENST00000635970 DNPEPQ9ULA0 475 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 CNTN6Q9UQ52 1028 aa15.91■□□□□ 0.14
CLN8-209ENST00000635970 HAUS5O94927 633 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 CBX6O95503 412 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 POU2F2P09086 479 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 CCR2P41597 374 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 VEPH1Q14D04 833 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 OASLQ15646 514 aaKnown RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 HIF1AQ16665 826 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 PABPC1LQ4VXU2 614 aaKnown RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 CLEC20AQ6ZU45 233 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 GET4Q7L5D6 327 aaPredicted RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 DNAJB7Q7Z6W7 309 aaPredicted RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 MTDHQ86UE4 582 aaKnown RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 TMC8Q8IU68 726 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 FAM136AQ96C01 138 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 HNRNPABQ99729 332 aaKnown RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 SYNCQ9H7C4 482 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 RABGEF1Q9UJ41 708 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 MAGED2Q9UNF1 606 aaPredicted RBP15.9■□□□□ 0.14
CLN8-209ENST00000635970 ASB3Q9Y575 518 aa15.9■□□□□ 0.14
CLN8-209ENST00000635970 BMP1P13497 986 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 GJA1P17302 382 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 PTPN2P17706 415 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms