RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 CPNE8Q86YQ8 564 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 CHPFQ8IZ52 775 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 ZNF557Q8N988 423 aaPredicted RBP8.1□□□□□ -1.11
CCDC163-204ENST00000628293 SUMF1Q8NBK3 374 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 TSTD1Q8NFU3 115 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 BTBD6Q96KE9 485 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 PSMB7Q99436 277 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 NUP85Q9BW27 656 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 CIPCQ9C0C6 399 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 NHEJ1Q9H9Q4 299 aaPredicted RBP8.1□□□□□ -1.11
CCDC163-204ENST00000628293 CD93Q9NPY3 652 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 SPTLC3Q9NUV7 552 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 NDFIP2Q9NV92 336 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 GPATCH2LQ9NWQ4 482 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
CCDC163-204ENST00000628293 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
CCDC163-204ENST00000628293 OR12D3Q9UGF7 316 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 SLC8A2Q9UPR5 921 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 SCINQ9Y6U3 715 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 DOCK9Q9BZ29 2069 aa8.1□□□□□ -1.11
CCDC163-204ENST00000628293 GON4LQ3T8J9 2241 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 A0A0D9SEW6 157 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TCRBV21S2A2A0A5A6 115 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 PRR23AA6NEV1 266 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 H0Y626 953 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 NPC1O15118 1278 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 AXIN1O15169 862 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TIMM44O43615 452 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 SRGAP2O75044 1071 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TPM1P09493 284 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 DLDP09622 509 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 NDUFV2P19404 249 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 IL1R2P27930 398 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 MIPP30301 263 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 CDC25BP30305 580 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 STK19P49842 368 aaPredicted RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 COPAP53621 1224 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 NRLP54845 237 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 SLC25A11Q02978 314 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 CAMK2GQ13555 558 aaPredicted RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ACBD5Q5T8D3 534 aaPredicted RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 SCYL2Q6P3W7 929 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ASCL5Q7RTU5 278 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TFAP2DQ7Z6R9 452 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TMEM139Q8IV31 216 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 NIPA2Q8N8Q9 360 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 UCMAQ8WVF2 138 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 FEM1AQ9BSK4 669 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 SNRNP25Q9BV90 132 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TPSD1Q9BZJ3 242 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ZYG11BQ9C0D3 744 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 MKRN2Q9H000 416 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 EPC1Q9H2F5 836 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 MTG2Q9H4K7 406 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 NOL6Q9H6R4 1146 aaKnown RBP8.09□□□□□ -1.11
CCDC163-204ENST00000628293 TMEM248Q9NWD8 314 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 ERVW-1Q9UQF0 538 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
CCDC163-204ENST00000628293 LAMA1P25391 3075 aa8.09□□□□□ -1.12
CCDC163-204ENST00000628293 PLXNA2O75051 1894 aa8.09□□□□□ -1.12
CCDC163-204ENST00000628293 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 DCLK1O15075 740 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 AKR1B10O60218 316 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 SNAP91O60641 907 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ZMPSTE24O75844 475 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 MTA2O94776 668 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 LCA5LO95447 670 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ASLP04424 464 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 RHOCP08134 193 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 SRPRAP08240 638 aaKnown RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 H2AFZP0C0S5 128 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 TMEM253P0C7T8 217 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 RHOQP17081 205 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 BCKDHBP21953 392 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 GLDCP23378 1020 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 L1CAMP32004 1257 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 PCK1P35558 622 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 AIF1P55008 147 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ZNF177Q13360 481 aaPredicted RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 SLC12A1Q13621 1099 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 MAP7D1Q3KQU3 841 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ARL13BQ3SXY8 428 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 RNF219Q5W0B1 726 aaPredicted RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 SERPINA13PQ6UXR4 307 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 H2AFVQ71UI9 128 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 SETD3Q86TU7 594 aaPredicted RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 FRMD1Q8N878 549 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 OR7D4Q8NG98 312 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ZNF564Q8TBZ8 553 aaPredicted RBP8.08□□□□□ -1.12
CCDC163-204ENST00000628293 HMGB4Q8WW32 186 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 GAB3Q8WWW8 586 aa8.08□□□□□ -1.12
CCDC163-204ENST00000628293 ATRIPQ8WXE1 791 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms