RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ASLP04424 464 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 DLDP09622 509 aaKnown RBP20.86■□□□□ 0.93
PTCD3-220ENST00000627371 TDGF1P13385 188 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 MZF1P28698 734 aaPredicted RBP20.86■□□□□ 0.93
PTCD3-220ENST00000627371 EPHB2P29323 1055 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 OR1E1P30953 314 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 HADHBP55084 474 aaKnown RBP20.86■□□□□ 0.93
PTCD3-220ENST00000627371 ENPP2Q13822 863 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 ZNF234Q14588 700 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 MESDQ14696 234 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 CRY1Q16526 586 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 SMTNL2Q2TAL5 461 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 ACRBPQ8NEB7 543 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 CCDC112Q8NEF3 446 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 CYB5D2Q8WUJ1 264 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 TEKT4Q8WW24 435 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 ALG14Q96F25 216 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 KCTD15Q96SI1 283 aaPredicted RBP20.86■□□□□ 0.93
PTCD3-220ENST00000627371 GABRG3Q99928 467 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 FEM1AQ9BSK4 669 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 CACNA2D2Q9NY47 1150 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 TFR2Q9UP52 801 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 OR51B4Q9Y5P0 310 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 NUP205Q92621 2012 aa20.86■□□□□ 0.93
PTCD3-220ENST00000627371 RARAP10276 462 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 IL12RB1P42701 662 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 MAPKAPK2P49137 400 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 ZNF135P52742 658 aaPredicted RBP20.85■□□□□ 0.93
PTCD3-220ENST00000627371 TPI1P60174 286 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 CSTF1Q05048 431 aaKnown RBP20.85■□□□□ 0.93
PTCD3-220ENST00000627371 DPYSL2Q16555 572 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 HADHQ16836 314 aaKnown RBP20.85■□□□□ 0.93
PTCD3-220ENST00000627371 PTPRNQ16849 979 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 ZNF528Q3MIS6 628 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 KCNT1Q5JUK3 1230 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 RNF219Q5W0B1 726 aaPredicted RBP20.85■□□□□ 0.93
PTCD3-220ENST00000627371 TXNRD3NBQ6F5E7 133 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 SDE2Q6IQ49 451 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 TSSK4Q6SA08 328 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 ZNF783Q6ZMS7 281 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 CPNE8Q86YQ8 564 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 MUC3BQ9H195 1237 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 CATSPERBQ9H7T0 1116 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 ZWILCHQ9H900 591 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 PLA2G4CQ9UP65 541 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 STON1Q9Y6Q2 735 aa20.85■□□□□ 0.93
PTCD3-220ENST00000627371 ILVBLA1L0T0 632 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 TMEM110-MUSTN1A8MSY1 372 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 EEF2KO00418 725 aaKnown RBP20.84■□□□□ 0.93
PTCD3-220ENST00000627371 FGF10O15520 208 aaPredicted RBP20.84■□□□□ 0.93
PTCD3-220ENST00000627371 SP9P0CG40 484 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 HOXB2P14652 356 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 HOXA6P31267 233 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 WASP42768 502 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 SSR1P43307 286 aaKnown RBP20.84■□□□□ 0.93
PTCD3-220ENST00000627371 DGKEP52429 567 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 VAV2P52735 878 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 PTPN5P54829 565 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 KRT83P78385 493 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 SULT2A1Q06520 285 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 TMEM92Q6UXU6 159 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 CAMKK1Q8N5S9 505 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 RTL3Q8N8U3 475 aaKnown RBP20.84■□□□□ 0.93
PTCD3-220ENST00000627371 HSPH1Q92598 858 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 HHIPQ96QV1 700 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTCD3-220ENST00000627371 NDFIP2Q9NV92 336 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 VPS28Q9UK41 221 aa20.84■□□□□ 0.93
PTCD3-220ENST00000627371 RCCD1A6NED2 376 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 WASH4PA8MWX3 477 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 PJA2O43164 708 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 SRPRAP08240 638 aaKnown RBP20.83■□□□□ 0.93
PTCD3-220ENST00000627371 COL9A1P20849 921 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 NOP2P46087 812 aaKnown RBP20.83■□□□□ 0.93
PTCD3-220ENST00000627371 ECT2LQ008S8 904 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 FNDC3BQ53EP0 1204 aaKnown RBP20.83■□□□□ 0.93
PTCD3-220ENST00000627371 PPP6R3Q5H9R7 873 aaPredicted RBP20.83■□□□□ 0.93
PTCD3-220ENST00000627371 SERPINA13PQ6UXR4 307 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 LRRC8AQ8IWT6 810 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 TSTD1Q8NFU3 115 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 NELL1Q92832 810 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 FAM126AQ9BYI3 521 aaPredicted RBP20.83■□□□□ 0.93
PTCD3-220ENST00000627371 TMEM245Q9H330 911 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 DNAI1Q9UI46 699 aa20.83■□□□□ 0.93
PTCD3-220ENST00000627371 A0A0D9SEW6 157 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 A0A1W2PQF6 199 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 BTNL10A8MVZ5 291 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 WASH3PC4AMC7 463 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 H0Y858 1186 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 ARHGAP6O43182 974 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 APBB3O95704 486 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 GOT1P17174 413 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 PRKCHP24723 683 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 SLC1A1P43005 524 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 CTSOP43234 321 aaPredicted RBP20.82■□□□□ 0.92
PTCD3-220ENST00000627371 HCAR3P49019 387 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 NUMBP49757 651 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 TAS2R40P59535 323 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 GNA12Q03113 381 aa20.82■□□□□ 0.92
PTCD3-220ENST00000627371 RFX8Q6ZV50 586 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms