RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
PCDHB17P-202ENST00000623466 C2orf69Q8N8R5 385 aa13.73□□□□□ -0.21
PCDHB17P-202ENST00000623466 PCDH19Q8TAB3 1148 aa13.73□□□□□ -0.21
PCDHB17P-202ENST00000623466 NAT14Q8WUY8 206 aa13.73□□□□□ -0.21
PCDHB17P-202ENST00000623466 ANK1P16157 1881 aa13.73□□□□□ -0.21
PCDHB17P-202ENST00000623466 ZBED1O96006 694 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 DARSP14868 501 aaKnown RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SDC4P31431 198 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SERPINB6P35237 376 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SNX17Q15036 470 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PLD5Q8N7P1 536 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SNX27Q96L92 541 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 MAGED2Q9UNF1 606 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CHADO15335 359 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PGM3O95394 542 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 METTL18O95568 372 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 IL1BP01584 269 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 TSHRP16473 764 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CDK7P50613 346 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 HDAC4P56524 1084 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 BCAR1P56945 870 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 INCA1Q0VD86 236 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 MSLNQ13421 630 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 LGSNQ5TDP6 509 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 TP53INP2Q8IXH6 220 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SLC35F5Q8WV83 523 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 KRT38O76015 456 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PGK1P00558 417 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CD1EP15812 388 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 TRIP10Q15642 601 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 BSPRYQ5W0U4 402 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CASC4Q6P4E1 433 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 KLC3Q6P597 504 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 NOTUMQ6P988 496 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 SATL1Q86VE3 508 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CCDC185Q8N715 623 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 PQLC3Q8N755 202 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 GDPD5Q8WTR4 605 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 FRMD8P1Q9BZ68 369 aaPredicted RBP13.72□□□□□ -0.21
PCDHB17P-202ENST00000623466 CITO14578 2027 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 KPNA7A9QM74 516 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 SPAG6O75602 509 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 GABRB2P47870 512 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 POU5F1BQ06416 359 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 SLC10A2Q12908 348 aaPredicted RBP13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 MED21Q13503 144 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 CCNIQ14094 377 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 TMCO4Q5TGY1 634 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 AGR3Q8TD06 166 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 KBTBD7Q8WVZ9 684 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 RNF157Q96PX1 679 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 MAN1C1Q9NR34 630 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 PAK5Q9P286 719 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 MORF4L1Q9UBU8 362 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 SCN4AP35499 1836 aa13.71□□□□□ -0.21
PCDHB17P-202ENST00000623466 PRKCHP24723 683 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 ARRB2P32121 409 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 MTTPP55157 894 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 SLC6A3Q01959 620 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 PDSS2Q86YH6 399 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 CEP70Q8NHQ1 597 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 PARK7Q99497 189 aaKnown RBP13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 THAP1Q9NVV9 213 aa13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.22
PCDHB17P-202ENST00000623466 SIN3BO75182 1162 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 GSRP00390 522 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 CLCN2P51788 898 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 GSTM4Q03013 218 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 NME3Q13232 169 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 TUBB3Q13509 450 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 FAM110CQ1W6H9 321 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 PPM1JQ5JR12 505 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 MAVSQ7Z434 540 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 WDR75Q8IWA0 830 aaKnown RBP13.7□□□□□ -0.22
PCDHB17P-202ENST00000623466 DEFB107AQ8IZN7 70 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms