RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ATAD1Q8NBU5 361 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC35B2Q8TB61 432 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 TFB1MQ8WVM0 346 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 NAF1Q96HR8 494 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 VTA1Q9NP79 307 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 DOCK5Q9H7D0 1870 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 KIF1CO43896 1103 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 FKTNO75072 461 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 POLBP06746 335 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 CALB2P22676 271 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 MIPP30301 263 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 OR1D2P34982 312 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 RABGGTBP53611 331 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 FAAP100Q0VG06 881 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 PPIL2Q13356 520 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 BOP1Q14137 746 aaKnown RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 IQSEC1Q6DN90 963 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM124AQ86V42 546 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 LGI2Q8N0V4 545 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SOCS4Q8WXH5 440 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SCLYQ96I15 445 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 MAGED4Q96JG8 741 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 CPXM1Q96SM3 734 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 ABCG8Q9H221 673 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC28A3Q9HAS3 691 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
PTPDC1-204ENST00000620992 HEATR9A2RTY3 570 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 AXIN1O15169 862 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TREHO43280 583 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TLL1O43897 1013 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 OCM2P0CE71 109 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 OCMP0CE72 109 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 HDCP19113 662 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC26A2P50443 739 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 YWHAZP63104 245 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CRADDP78560 199 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CDC16Q13042 620 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ZC3H12AQ5D1E8 599 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CAPRIN2Q6IMN6 1127 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CLNKQ7Z7G1 428 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 UCMAQ8WVF2 138 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ACSS3Q9H6R3 686 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ARMCX1Q9P291 453 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CYP7B1O75881 506 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM155BO75949 473 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MYO1DO94832 1006 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 RALBP11234 206 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 YWHAQP27348 245 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PTPN4P29074 926 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SOAT1P35610 550 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TARBP2Q15633 366 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PLEKHG4Q58EX7 1191 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ARMC6Q6NXE6 501 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ARHGAP18Q8N392 663 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 NDRG1Q92597 394 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC7A6OSQ96CW6 309 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 FICDQ9BVA6 458 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF518BQ9C0D4 1074 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 HIPK3Q9H422 1215 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 DENND2DQ9H6A0 471 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 BATF3Q9NR55 127 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM161AQ9NX61 479 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MRPS23Q9Y3D9 190 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 EP300Q09472 2414 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 FKBP9O95302 570 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SETSIPP0DME0 302 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 T-ENOLP0DO92 83 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SKIP12755 728 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 RPL17P18621 184 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 INPP1P49441 399 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 DAB2P98082 770 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PARP6Q2NL67 630 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC45A4Q5BKX6 768 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PPM1LQ5SGD2 360 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CELF3Q5SZQ8 465 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PLPP4Q5VZY2 271 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 BBS12Q6ZW61 710 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 FKBP9P1Q75LS8 142 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ARID3BQ8IVW6 561 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PHF21BQ96EK2 531 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 DACH2Q96NX9 599 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM120AQ9BXJ8 343 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 YIPF3Q9GZM5 350 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ING2Q9H160 280 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 GOLGA8QA0A0J9YX86 632 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 GOLGA8OA6NCC3 632 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SIGLEC16A6NMB1 481 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms