RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 STAU1O95793 577 aaKnown RBP20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 CLCN2P51788 898 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 USP46P62068 366 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 RBP5P82980 135 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 IRF9Q00978 393 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 TNFAIP2Q03169 654 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 TMEM259Q4ZIN3 620 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 SPANXN3Q5MJ09 141 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 ZFP1Q6P2D0 407 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 P2RY11Q96G91 374 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 CNBD2Q96M20 576 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 CDRT15Q96T59 188 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 WDR55Q9H6Y2 383 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 PRMT7Q9NVM4 692 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 SRGAP2BP0DMP2 458 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 LIMK2P53671 638 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 AMHR2Q16671 573 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 MYLK3Q32MK0 819 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 PLPPR4Q7Z2D5 763 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 CATSPER1Q8NEC5 780 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 ADCY4Q8NFM4 1077 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 ZFP28Q8NHY6 868 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 KBTBD7Q8WVZ9 684 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 CPB2Q96IY4 423 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 MRPL45Q9BRJ2 306 aaKnown RBP20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 COPS7BQ9H9Q2 264 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 PREBQ9HCU5 417 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 APPL1Q9UKG1 709 aa20.01■□□□□ 0.79
PDLIM3-212ENST00000620787 KPNA7A9QM74 516 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 BTBD19C9JJ37 291 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 MATN2O00339 956 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 TRIM13O60858 407 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 LTFP02788 710 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 MPSTP25325 297 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 APOFQ13790 326 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 SOWAHAQ2M3V2 549 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 USP41Q3LFD5 358 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 FSTL4Q6MZW2 842 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 ZDHHC17Q8IUH5 632 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 GATA5Q9BWX5 397 aaPredicted RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 PLXNA1Q9UIW2 1896 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 A0A096LPK6 155 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 MYOCOSA0A1B0GUC4 107 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 STRNO43815 780 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 CHRNGP07510 517 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 ATP6V1B1P15313 513 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 SPRP35270 261 aaPredicted RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 MSX2P35548 267 aaPredicted RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 GTF2A2P52657 109 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 MS4A2Q01362 244 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 OLIG2Q13516 323 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 CEACAM7Q14002 265 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 DLG2Q15700 870 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 LSM12Q3MHD2 195 aaKnown RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 STRA8Q7Z7C7 330 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 SENP6Q9GZR1 1112 aaPredicted RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 ZNF385DQ9H6B1 395 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 CAB39LQ9H9S4 337 aa20■□□□□ 0.79
PDLIM3-212ENST00000620787 GNEQ9Y223 722 aaKnown RBP20■□□□□ 0.79
PDLIM3-212ENST00000620787 NEMP1O14524 444 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 HNRNPRO43390 633 aaKnown RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 H2AFYO75367 372 aaKnown RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 AMHP03971 560 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 CAPNS1P04632 268 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 PKNOX1P55347 436 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 CDKL1Q00532 357 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 CREB5Q02930 508 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 FAM187BQ17R55 369 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 SLC26A9Q7LBE3 791 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 SAMD7Q7Z3H4 446 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 RP9Q8TA86 221 aaKnown RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 SLC7A14Q8TBB6 771 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 RCN3Q96D15 328 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 MOCOSQ96EN8 888 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 NFKBIZQ9BYH8 718 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 DMTF1Q9Y222 760 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 PRSS51A0A1B0GVH4 220 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 MPOP05164 745 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 DPP6P42658 865 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 GLUD2P49448 558 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 C6orf52Q5T4I8 152 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 ZNF567Q8N184 647 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 BHLHE22Q8NFJ8 381 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 AGAP3Q96P47 875 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 AGAP2Q99490 1192 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 PKP2Q99959 881 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 LPIN3Q9BQK8 851 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 ILKAPQ9H0C8 392 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 LMCD1Q9NZU5 365 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 SEPT10Q9P0V9 454 aa19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 G3BP2Q9UN86 482 aaKnown RBP19.99■□□□□ 0.79
PDLIM3-212ENST00000620787 CCDC160A6NGH7 325 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 NOP56O00567 594 aaKnown RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 EPHA3P29320 983 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 ARL4AP40617 200 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 ABCG1P45844 678 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 CYLC2Q14093 348 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
PDLIM3-212ENST00000620787 IYDQ6PHW0 289 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms