RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	USP18	Q9UMW8	372 aa		11.1	□□□□□ -0.63
TARDBP-223	ENST00000620632	SLC8A2	Q9UPR5	921 aa		11.1	□□□□□ -0.63
TARDBP-223	ENST00000620632		R4GN57	208 aa		11.1	□□□□□ -0.63
TARDBP-223	ENST00000620632	SHROOM3	Q8TF72	1996 aa		11.1	□□□□□ -0.63
TARDBP-223	ENST00000620632	THADA	Q6YHU6	1953 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632		A0A0U1RQJ8	604 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	EIF3CL	B5ME19	914 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	MYO1F	O00160	1098 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	CREB3	O43889	395 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	PRPSAP2	O60256	369 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	SNAP91	O60641	907 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	MTA2	O94776	668 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	NDUFA10	O95299	355 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RHOC	P08134	193 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	DLD	P09622	509 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	POLR2E	P19388	210 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	GLDC	P23378	1020 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	PCK1	P35558	622 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	MAGEA1	P43355	309 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	STK19	P49842	368 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	PLK1	P53350	603 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	AIF1	P55008	147 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	TAS2R40	P59535	323 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	SRSF5	Q13243	272 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZNF177	Q13360	481 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ACAP1	Q15027	740 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	EOGT	Q5NDL2	527 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ERMARD	Q5T6L9	678 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RNF219	Q5W0B1	726 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RWDD4	Q6NW29	188 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RASSF3	Q86WH2	238 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	TMTC1	Q8IUR5	882 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZNF557	Q8N988	423 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZBTB44	Q8NCP5	570 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ACRBP	Q8NEB7	543 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	OR7D4	Q8NG98	312 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	CCDC26	Q8TAB7	109 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ATRIP	Q8WXE1	791 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RFFL	Q8WZ73	363 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	TBC1D31	Q96DN5	1066 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	RPL10L	Q96L21	214 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	EIF3C	Q99613	913 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	BAG1	Q99933	345 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	FEM1A	Q9BSK4	669 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	DHX35	Q9H5Z1	703 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	NOL6	Q9H6R4	1146 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	CD93	Q9NPY3	652 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	TMEM248	Q9NWD8	314 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	SALL4	Q9UJQ4	1053 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	INTU	Q9ULD6	942 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	ERVW-1	Q9UQF0	538 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	PCDHA13	Q9Y5I0	950 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	NUMA1	Q14980	2115 aa		11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-223	ENST00000620632	FRYL	O94915	3013 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TCRBV21S2A2	A0A5A6	115 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TMEM110-MUSTN1	A8MSY1	372 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TIMM44	O43615	452 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	LILRB5	O75023	590 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	PROSC	O94903	275 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	APBB3	O95704	486 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	RARA	P10276	462 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	RHOQ	P17081	205 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	GOT1	P17174	413 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	GABRG2	P18507	467 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	EPHB2	P29323	1055 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	OR1E1	P30953	314 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	HOXA6	P31267	233 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	CYLC1	P35663	651 aa	Predicted RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ACVRL1	P37023	503 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	SLC12A1	Q13621	1099 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	MESD	Q14696	234 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TCEAL1	Q15170	157 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ATP13A4	Q4VNC1	1196 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	FNDC3B	Q53EP0	1204 aa	Known RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ANO7	Q6IWH7	933 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	SERPINA13P	Q6UXR4	307 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TRMT11	Q7Z4G4	463 aa	Known RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	SETD3	Q86TU7	594 aa	Predicted RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	RTL3	Q8N8U3	475 aa	Known RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TSTD1	Q8NFU3	115 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	UCMA	Q8WVF2	138 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	HSPH1	Q92598	858 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ATOH1	Q92858	354 aa	Predicted RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	TPSD1	Q9BZJ3	242 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	GOLPH3	Q9H4A6	298 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ZWILCH	Q9H900	591 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ZSCAN32	Q9NX65	697 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	DNAI1	Q9UI46	699 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	SLCO3A1	Q9UIG8	710 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	MFHAS1	Q9Y4C4	1052 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	ACTL7A	Q9Y615	435 aa		11.08	□□□□□ -0.64
TARDBP-223	ENST00000620632	SDK1	Q7Z5N4	2213 aa		11.07	□□□□□ -0.64
TARDBP-223	ENST00000620632	ILVBL	A1L0T0	632 aa		11.07	□□□□□ -0.64
TARDBP-223	ENST00000620632	GOLGA6L3	A6NEY3	463 aa		11.07	□□□□□ -0.64

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