RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
COL1A2-213ENST00000620463 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
COL1A2-213ENST00000620463 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
COL1A2-213ENST00000620463 TINF2Q9BSI4 451 aa13.38□□□□□ -0.27
COL1A2-213ENST00000620463 CD274Q9NZQ7 290 aa13.38□□□□□ -0.27
COL1A2-213ENST00000620463 C3orf18Q9UK00 162 aa13.38□□□□□ -0.27
COL1A2-213ENST00000620463 USP18Q9UMW8 372 aa13.38□□□□□ -0.27
COL1A2-213ENST00000620463 LOC110117498-PIK3R3F6TDL0 507 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 GAS2O43903 313 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 SPIRE1Q08AE8 756 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PLEKHO2Q8TD55 490 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 SIPA1Q96FS4 1042 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 SH3PXD2BA1X283 911 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 TBX1O43435 398 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 IFI30P13284 250 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ITIH1P19827 911 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 KRT20P35900 424 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ABCG1P45844 678 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 CDK9P50750 372 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 COX10Q12887 443 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ZSWIM7Q19AV6 140 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 SLC9A4Q6AI14 798 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PPP1R10Q96QC0 940 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 MRPL4Q9BYD3 311 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 SAGE2PA6NJ88 616 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PRKD3O94806 890 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 DDX5P17844 614 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 AKT1P31749 480 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 CACNB3P54284 484 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PRKAA2P54646 552 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 POU4F1Q01851 419 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 TRIM32Q13049 653 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 FASTKD3Q14CZ7 662 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PCSK7Q16549 785 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 ZNF423Q2M1K9 1284 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 PLA2G4FQ68DD2 849 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 CAMKK1Q8N5S9 505 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 NSUN6Q8TEA1 469 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 RAB2BQ8WUD1 216 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 FAM120BQ96EK7 910 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 WDR55Q9H6Y2 383 aaPredicted RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 FAM8A1Q9UBU6 413 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 AFF4Q9UHB7 1163 aaKnown RBP13.37□□□□□ -0.27
COL1A2-213ENST00000620463 CPS1P31327 1500 aa13.37□□□□□ -0.27
COL1A2-213ENST00000620463 A0A1W2PPW3 197 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PSMD3O43242 534 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 SULT1E1P49888 294 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PLK1P53350 603 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PDIA6Q15084 440 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ARHGAP36Q6ZRI8 547 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ABRAQ8N0Z2 381 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 FBXO30Q8TB52 745 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PANX3Q96QZ0 392 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 TRIM45Q9H8W5 580 aaPredicted RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 STOML2Q9UJZ1 356 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ING4Q9UNL4 249 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PCNAP12004 261 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 HSD17B4P51659 736 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 LGALS3BPQ08380 585 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 HIPK1Q86Z02 1210 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 HDAC2Q92769 488 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 C19orf60Q96EN9 201 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 FAM149AA5PLN7 773 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 M0QZ92 97 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 EEF2KO00418 725 aaKnown RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 CCNE2O96020 404 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 MGAT1P26572 445 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 PTGIRP43119 386 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 NFIL3Q16649 462 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 CA9Q16790 459 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
COL1A2-213ENST00000620463 EML3Q32P44 896 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
COL1A2-213ENST00000620463 GRTP1Q5TC63 336 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms