RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 MTRF1O75570 445 aaKnown RBP12.52□□□□□ -0.41
MATR3-227ENST00000618441 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.41
MATR3-227ENST00000618441 NCAM1P13591 858 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 IDUAP35475 653 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 NAMPTP43490 491 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 STX1BP61266 288 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 PTK2BQ14289 1009 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 ARHGEF6Q15052 776 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 INAVAQ3KP66 663 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 ZNF276Q8N554 614 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 EPS8L1Q8TE68 723 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 NRBF2Q96F24 287 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 FAM84BQ96KN1 310 aaPredicted RBP12.52□□□□□ -0.41
MATR3-227ENST00000618441 MTMR9Q96QG7 549 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 ALPK1Q96QP1 1244 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 OLAHQ9NV23 265 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 THAP1Q9NVV9 213 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 TEKT2Q9UIF3 430 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 ECE1P42892 770 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 KLF10Q13118 480 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 IKBKEQ14164 716 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 GRM4Q14833 912 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 IL31Q6EBC2 164 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 CYP20A1Q6UW02 462 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
MATR3-227ENST00000618441 CLEC10AQ8IUN9 316 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 HACE1Q8IYU2 909 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 NEDD1Q8NHV4 660 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 GLMNQ92990 594 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 TBCBQ99426 244 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 MAGEE1Q9HCI5 957 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 TLK1Q9UKI8 766 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 ZNF804BA4D1E1 1349 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 B4GAT1O43505 415 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 COX10Q12887 443 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SLCO6A1Q86UG4 719 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CADM2Q8N3J6 435 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 TRUB1Q8WWH5 349 aaKnown RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 CNDP1Q96KN2 507 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SMAD5Q99717 465 aaKnown RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 WDR41Q9HAD4 459 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 STMN3Q9NZ72 180 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 STK39Q9UEW8 545 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 TTLL3Q9Y4R7 772 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 A0A1W2PQ72 361 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 NRP1O14786 923 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 ACSL4O60488 711 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 MT-ND1P03886 318 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 AOC1P19801 751 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 ZNF135P52742 658 aaPredicted RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 SLC18A1P54219 525 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CACNB3P54284 484 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 PON2Q15165 354 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 C16orf89Q6UX73 402 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CBR4Q8N4T8 237 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SNX19Q92543 992 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CD101Q93033 1021 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SLC2A11Q9BYW1 496 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 C1orf21Q9H246 121 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 ITGA11Q9UKX5 1188 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 UBE4BO95155 1302 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CLPXO76031 633 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 FMO4P31512 558 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 SCNN1AP37088 669 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 RPS3AP61247 264 aaKnown RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 PRPSAP1Q14558 356 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 TWF2Q6IBS0 349 aaKnown RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 ACDQ96AP0 544 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 EFHD2Q96C19 240 aaPredicted RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 EFHD1Q9BUP0 239 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
MATR3-227ENST00000618441 PLLPQ9Y342 182 aa12.51□□□□□ -0.41
MATR3-227ENST00000618441 HADHAP40939 763 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 IFNEQ86WN2 208 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 FNIP1Q8TF40 1166 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 DEPDC1BQ8WUY9 529 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 C7orf26Q96N11 449 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 KLHL32Q96NJ5 620 aa12.5□□□□□ -0.41
MATR3-227ENST00000618441 DBNDD1Q9H9R9 158 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms