RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
CIITA-212ENST00000618207 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
CIITA-212ENST00000618207 GALNTL6Q49A17 601 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 HSP90AA5PQ58FG0 334 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 NOMO2Q5JPE7 1267 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 SCD5Q86SK9 330 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 NUDCD3Q8IVD9 361 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 CDKL2Q92772 493 aa12.7□□□□□ -0.38
CIITA-212ENST00000618207 PRR11Q96HE9 360 aaPredicted RBP12.7□□□□□ -0.38
CIITA-212ENST00000618207 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
CIITA-212ENST00000618207 IRAK2O43187 625 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 CYP11A1P05108 521 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 POLBP06746 335 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 FAM163BP0C2L3 166 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ALADP13716 330 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 USP46P62068 366 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ZBTB16Q05516 673 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 SCAPQ12770 1279 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 TEX44Q53QW1 395 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 FAM171A1Q5VUB5 890 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 C14orf80Q86SX3 495 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 SPNS2Q8IVW8 549 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 PKMYT1Q99640 499 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 CAB39LQ9H9S4 337 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 TOMM70O94826 608 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ALDOAP04075 364 aaKnown RBP12.69□□□□□ -0.38
CIITA-212ENST00000618207 PGAM1P18669 254 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 SERPINB6P35237 376 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
CIITA-212ENST00000618207 BST1Q10588 318 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 E2F5Q15329 346 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 CNTD1Q8N815 330 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
CIITA-212ENST00000618207 ACSS2Q9NR19 701 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 BFARQ9NZS9 450 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 IGSF9Q9P2J2 1179 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 HEY2Q9UBP5 337 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 ZNF180Q9UJW8 692 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 DSEQ9UL01 958 aa12.69□□□□□ -0.38
CIITA-212ENST00000618207 NEBLO76041 1014 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 GSTA1P08263 222 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 NQO1P15559 274 aaKnown RBP12.68□□□□□ -0.38
CIITA-212ENST00000618207 TUBP50607 506 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 CDK16Q00536 496 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 EFEMP1Q12805 493 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 DLG2Q15700 870 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 RGS9BPQ6ZS82 235 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
CIITA-212ENST00000618207 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 PGAP3Q96FM1 320 aaPredicted RBP12.68□□□□□ -0.38
CIITA-212ENST00000618207 CERS2Q96G23 380 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 C20orf27Q9GZN8 174 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 KANSL3Q9P2N6 904 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ZFP69BQ9UJL9 534 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
CIITA-212ENST00000618207 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 PMPCBO75439 489 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 AP2A1O95782 977 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 DHRS4L1P0CG22 281 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 MX2P20592 715 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 SERPINB3P29508 390 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 TYK2P29597 1187 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 CCR1P32246 355 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ARFIP2P53365 341 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 POU6F1Q14863 301 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 PCSK7Q16549 785 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 TTC7BQ86TV6 843 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 GBP7Q8N8V2 638 aaPredicted RBP12.68□□□□□ -0.38
CIITA-212ENST00000618207 E2F7Q96AV8 911 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 TMEM120AQ9BXJ8 343 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 SLC39A8Q9C0K1 460 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
CIITA-212ENST00000618207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 TTC24A2A3L6 582 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
CIITA-212ENST00000618207 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MYL2P10916 166 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 MLNP12872 115 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 CCNB1P14635 433 aa12.67□□□□□ -0.38
CIITA-212ENST00000618207 CPB1P15086 417 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms