RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TRHDEQ9UKU6 1024 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 CDH9Q9ULB4 789 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 PCDHA11Q9Y5I1 949 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 ASTN1O14525 1302 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 TADA2AO75478 443 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 MICAL2O94851 1124 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 EIF2S1P05198 315 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 ALOX15P16050 662 aaPredicted RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 NELFEP18615 380 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 ABCG1P45844 678 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 TIMM50Q3ZCQ8 353 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 FAM71AQ8IYT1 594 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 AMER2Q8N7J2 671 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 TCF12Q99081 682 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 TRIM8Q9BZR9 551 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 LSM7Q9UK45 103 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 MAGEA10P43363 369 aaPredicted RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 RPS7P62081 194 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 TNK2Q07912 1038 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 TSNQ15631 228 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 ATP13A4Q4VNC1 1196 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 ZNF605Q86T29 641 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 GMCL1P1Q8NEA9 526 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 CHST13Q8NET6 341 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 RBM46Q8TBY0 533 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 ACMSDQ8TDX5 336 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 PRRG3Q9BZD7 231 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 CDHR5Q9HBB8 845 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 BARX2Q9UMQ3 279 aaPredicted RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 PSMD13Q9UNM6 376 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 ANXA6P08133 673 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 GSTM1P09488 218 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 CYP2C9P11712 490 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 LSM3P62310 102 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 ACVR2BQ13705 512 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 CELF6Q96J87 481 aaKnown RBP19.19■□□□□ 0.66
SPAST-203ENST00000615843 GINS4Q9BRT9 223 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 ENTPD7Q9NQZ7 604 aa19.19■□□□□ 0.66
SPAST-203ENST00000615843 HARS2P49590 506 aaKnown RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 FHDC1Q9C0D6 1143 aaPredicted RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 TRIM39Q9HCM9 518 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 MTF2Q9Y483 593 aaPredicted RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 FAM220BPB1ANY3 271 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 EML1O00423 815 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 CTSHP09668 335 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 CCT3P49368 545 aaKnown RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 CLCN3P51790 818 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ITGA1P56199 1179 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ATG14Q6ZNE5 492 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 MECRQ9BV79 373 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 A0A087X1B8 175 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 CAPN8A6NHC0 703 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 TISP43B9A030 160 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 HDAC3O15379 428 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 CXCL8P10145 99 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 IRF1P10914 325 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ACAT1P24752 427 aaKnown RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 OR56A4Q8NGH8 313 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 NMUR2Q9GZQ4 415 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 USP12O75317 370 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 TM7SF2O76062 418 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 KRT6AP02538 564 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 COL9A3Q14050 684 aaPredicted RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 FASTKD5Q7L8L6 764 aaKnown RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 GAKO14976 1311 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ADGRB2O60241 1585 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 NDST1P52848 882 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 FMO1Q01740 532 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 NPNTQ6UXI9 565 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ADGRF2Q8IZF7 708 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 METTL6Q8TCB7 284 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 ENOPH1Q9UHY7 261 aa19.18■□□□□ 0.66
SPAST-203ENST00000615843 PRG3Q9Y2Y8 225 aaPredicted RBP19.18■□□□□ 0.66
SPAST-203ENST00000615843 DYNC1LI2O43237 492 aaPredicted RBP19.17■□□□□ 0.66
SPAST-203ENST00000615843 TRMUO75648 421 aaKnown RBP19.17■□□□□ 0.66
SPAST-203ENST00000615843 CALCAP01258 141 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 LBPP18428 481 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 RBM15BQ8NDT2 890 aaKnown RBP19.17■□□□□ 0.66
SPAST-203ENST00000615843 ADCY4Q8NFM4 1077 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 LYPLA1O75608 230 aaPredicted RBP19.17■□□□□ 0.66
SPAST-203ENST00000615843 GABRB2P47870 512 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 NFIAQ12857 509 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 MGAT5BQ3V5L5 792 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 CASP12Q6UXS9 341 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 ZDHHC17Q8IUH5 632 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 MAP4K3Q8IVH8 894 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 TPD52L3Q96J77 140 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 TMEM39BQ9GZU3 492 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 EPB41L1Q9H4G0 881 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 ADAM28Q9UKQ2 775 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 GNG14A0A1W2PPG7 69 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 CYP1A1P04798 512 aaPredicted RBP19.17■□□□□ 0.66
SPAST-203ENST00000615843 ALOX5P09917 674 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 GRIA4P48058 902 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 SPATA16Q9BXB7 569 aa19.17■□□□□ 0.66
SPAST-203ENST00000615843 PAEPP09466 180 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms