RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ARHGAP12Q8IWW6 846 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 SPATA4Q8NEY3 305 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 OR52K2Q8NGK3 314 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 WFDC5Q8TCV5 224 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 DEPDC1BQ8WUY9 529 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 DNASE1L2Q92874 299 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 AZIN2Q96A70 460 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 E2F7Q96AV8 911 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 EPAS1Q99814 870 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TRMT61BQ9BVS5 477 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 DDX47Q9H0S4 455 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 NOL6Q9H6R4 1146 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 C10orf88Q9H8K7 445 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TRPV5Q9NQA5 729 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 RNF14Q9UBS8 474 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 EFR3BQ9Y2G0 817 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 MTF2Q9Y483 593 aaPredicted RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 WNT6Q9Y6F9 365 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 ANKRD36A6QL64 1941 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 E2F8A0AVK6 867 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 HEPACAM2A8MVW5 462 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 F5H5T6 163 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 APOC4-APOC2K7ER74 178 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 ARNTLO00327 626 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 KRIT1O00522 736 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 APOL1O14791 398 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 PHF2O75151 1096 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 LATS1O95835 1130 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 APOC2P02655 101 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 GLULP15104 373 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 GDI1P31150 447 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 CETN2P41208 172 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 PAFAH1B1P43034 410 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 KCNJ1P48048 391 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 OTUD4Q01804 1114 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 CKAP4Q07065 602 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 SNX1Q13596 522 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 TFDP2Q14188 446 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 PAFAH1B3Q15102 231 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 NOMO1Q15155 1222 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 ODF2Q5BJF6 829 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 ADGRF1Q5T601 910 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 AFMIDQ63HM1 303 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 RNF43Q68DV7 783 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 RWDD4Q6NW29 188 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 TPRG1Q6ZUI0 275 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 TFAP2DQ7Z6R9 452 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 DDX42Q86XP3 938 aaKnown RBP eCLIP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 MAP7D3Q8IWC1 876 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 CPXM2Q8N436 756 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 RTL3Q8N8U3 475 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 C12orf50Q8NA57 414 aaPredicted RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 SLC35B2Q8TB61 432 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 ACTL9Q8TC94 416 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 IRF7Q92985 503 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 CLDN23Q96B33 292 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 CELF6Q96J87 481 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 RPRD1AQ96P16 312 aaPredicted RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 OLFM3Q96PB7 478 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 NELL2Q99435 816 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 LINC00597Q9H2U6 94 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 BRD9Q9H8M2 597 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 KIF9Q9HAQ2 790 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 LTB4R2Q9NPC1 389 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 HEBP1Q9NRV9 189 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 TMEM51Q9NW97 253 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 TMEM248Q9NWD8 314 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 OBP2AQ9NY56 170 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 DTLQ9NZJ0 730 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 PPARGC1AQ9UBK2 798 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 SLC12A6Q9UHW9 1150 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 LSM7Q9UK45 103 aaKnown RBP8.26□□□□□ -1.09
PCDH9-205ENST00000614931 DNPEPQ9ULA0 475 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 MYLKQ15746 1914 aa8.26□□□□□ -1.09
PCDH9-205ENST00000614931 MUC22E2RYF6 1773 aaPredicted RBP8.25□□□□□ -1.09
PCDH9-205ENST00000614931 CTAGE15A4D2H0 777 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 FAM170BA6NMN3 283 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 RAD51CO43502 376 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 LIASO43766 372 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 TBL1XO60907 577 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 TJP3O95049 919 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 SLU7O95391 586 aaKnown RBP8.25□□□□□ -1.09
PCDH9-205ENST00000614931 CTAGE8P0CG41 777 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 ARSAP15289 507 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 VAV1P15498 845 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 RHOQP17081 205 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 CD72P21854 359 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 TGM2P21980 687 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 HOXD9P28356 352 aaPredicted RBP8.25□□□□□ -1.09
PCDH9-205ENST00000614931 HTR7P34969 479 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 COILP38432 576 aaPredicted RBP8.25□□□□□ -1.09
PCDH9-205ENST00000614931 PTGIRP43119 386 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 MAGEA9P43362 315 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 NUMBP49757 651 aa8.25□□□□□ -1.09
PCDH9-205ENST00000614931 ZNF135P52742 658 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms