RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ANPEPP15144 967 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TKTP29401 623 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 RGS2P41220 211 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MGAT3Q09327 533 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 NIPAL4Q0D2K0 466 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PTAR1Q7Z6K3 402 aaPredicted RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SCUBE1Q8IWY4 988 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MIPOL1Q8TD10 442 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SLC2A14Q8TDB8 520 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DPF3Q92784 378 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SERAC1Q96JX3 654 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PPP1R16BQ96T49 567 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 APBA2Q99767 749 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FAM49BQ9NUQ9 324 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CHCHD3Q9NX63 227 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 STAP1Q9ULZ2 295 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PIN4Q9Y237 131 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 I3L4J1 428 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TREHO43280 583 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ZNF623O75123 536 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DUSP11O75319 330 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 STAMBPO95630 424 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TFE3P19532 575 aaPredicted RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 INHBCP55103 352 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ARHGAP8P85298 464 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CTC1Q2NKJ3 1217 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CLEC20AQ6ZU45 233 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CCDC185Q8N715 623 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ANKRD27Q96NW4 1050 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DNAAF2Q9NVR5 837 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 LIN7AO14910 233 aaPredicted RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 METTL18O95568 372 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PEX2P28328 305 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MED21Q13503 144 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PDK1Q15118 436 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 UTS2BQ765I0 119 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.12□□□□□ -0.638e-8■■■□□ 17.7
SENP3-EIF4A1-201ENST00000614237 NETO2Q8NC67 525 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 WNT8BQ93098 351 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MMADHCQ9H3L0 296 aaPredicted RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 KANSL3Q9P2N6 904 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ANGPTL2Q9UKU9 493 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 HHLA1C9JL84 531 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CACNG3O60359 315 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 LYPLA1O75608 230 aaPredicted RBP11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 GRAP2O75791 330 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 KRT38O76015 456 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DNAJB2P25686 324 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SOX11P35716 441 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ARL4AP40617 200 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MAGEA12P43365 314 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 AQP4P55087 323 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MRPS6P82932 125 aaKnown RBP11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 GBE1Q04446 702 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DLG1Q12959 904 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CDO1Q16878 200 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 INSCQ1MX18 579 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 C16orf46Q6P387 395 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MYLK4Q86YV6 388 aaPredicted RBP11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CLEC4CQ8WTT0 213 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 EBF4Q9BQW3 602 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TRPV2Q9Y5S1 764 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SPECC1L-ADORA2AF8WAN1 911 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MTSS1O43312 755 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 F9P00740 461 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 AKAP5P24588 427 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MAP7Q14244 749 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MROH9Q5TGP6 573 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DEFB106AQ8N104 65 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 STON2Q8WXE9 905 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TRIM62Q9BVG3 475 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms