RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 CCNKO75909 580 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 RARAP10276 462 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 IMPDH2P12268 514 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 CCL5P13501 91 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 PDGFRAP16234 1089 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 XPAP23025 273 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 FASP25445 335 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 LRPAP1P30533 357 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SPRP35270 261 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SOX6P35712 828 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 ACOT2P49753 483 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 PURAQ00577 322 aaKnown RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 MGAT3Q09327 533 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 RIPK1Q13546 671 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 ITGA7Q13683 1181 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 CCL14Q16627 93 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 ZSWIM7Q19AV6 140 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 GLRA4Q5JXX5 417 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 DGKKQ5KSL6 1271 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SEL1L3Q68CR1 1132 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SH3RF1Q7Z6J0 888 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 PRUNE1Q86TP1 453 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 LRRC49Q8IUZ0 686 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 CDKL3Q8IVW4 592 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 C4orf19Q8IY42 314 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SLC20A1Q8WUM9 679 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SEPT1Q8WYJ6 367 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 KRT35Q92764 455 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 ELMO2Q96JJ3 720 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 MARK4Q96L34 752 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 C1orf50Q9BV19 199 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 GCOM2Q9BZD3 368 aaPredicted RBP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 SEMA6BQ9H3T3 888 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.66□□□□□ -1.5
SYNRG-220ENST00000614000 CCDC167Q9P0B6 97 aa5.66□□□□□ -1.5
SYNRG-220ENST00000614000 DENND4AQ7Z401 1863 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 HEATR9A2RTY3 570 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 LIN7AO14910 233 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 C6orf222P0C671 652 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ZSCAN5DPP0CG00 497 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 IFI30P13284 250 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 RFC2P35250 354 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 SLC1A1P43005 524 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 NUMBP49757 651 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ATP12AP54707 1039 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 AMPD2Q01433 879 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 SP2Q02086 613 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 UBAP2LQ14157 1087 aaKnown RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 EPHA7Q15375 998 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 PAGE2BQ5JRK9 111 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 PDZK1Q5T2W1 519 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ZNF57Q68EA5 555 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 FAM45BPQ6NSW5 357 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 TTC27Q6P3X3 843 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 HAUS6Q7Z4H7 955 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ALYREFQ86V81 257 aaKnown RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ECHDC2Q86YB7 292 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 FAM47BQ8NA70 645 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ATG16L2Q8NAA4 619 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 DRAXINQ8NBI3 349 aaPredicted RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 PTPRN2Q92932 1015 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 RNF145Q96MT1 663 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 ZNF570Q96NI8 536 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 SRPK1Q96SB4 655 aaKnown RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 APOL2Q9BQE5 337 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 GPATCH1Q9BRR8 931 aaKnown RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 KATNAL1Q9BW62 490 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 MARCH7Q9H992 704 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 FAM32AQ9Y421 112 aaKnown RBP5.65□□□□□ -1.5
SYNRG-220ENST00000614000 RPS6KL1Q9Y6S9 549 aa5.65□□□□□ -1.5
SYNRG-220ENST00000614000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.65□□□□□ -1.51
SYNRG-220ENST00000614000 BOLA2-SMG1P6H3BVE0 249 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 APOL1O14791 398 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 SPTLC1O15269 473 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.51
SYNRG-220ENST00000614000 NADKO95544 446 aaPredicted RBP5.65□□□□□ -1.51
SYNRG-220ENST00000614000 SUPT20HL2P0C7V6 817 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 MAPTP10636 758 aaKnown RBP5.65□□□□□ -1.51
SYNRG-220ENST00000614000 RRM1P23921 792 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 PON1P27169 355 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 ABCG1P45844 678 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 IST1P53990 364 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 POU5F1Q01860 360 aaKnown RBP5.65□□□□□ -1.51
SYNRG-220ENST00000614000 FAAP100Q0VG06 881 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 TRAF3Q13114 568 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 GRM1Q13255 1194 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 DGUOKQ16854 277 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 FAM83EQ2M2I3 478 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 PTPN20Q4JDL3 420 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 PDXDC2PQ6P474 469 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 DSTYKQ6XUX3 929 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 AKAP14Q86UN6 197 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 KRT73Q86Y46 540 aa5.65□□□□□ -1.51
SYNRG-220ENST00000614000 ULK2Q8IYT8 1036 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms