RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLC11A2P49281 568 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 TERF1P54274 439 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 SPEM2Q0P670 501 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 FZD5Q13467 585 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 PAFAH1B3Q15102 231 aaKnown RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 NOMO1Q15155 1222 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 LLGL1Q15334 1064 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 TEAD2Q15562 447 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 C5orf22Q49AR2 442 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 SLC44A4Q53GD3 710 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 GPR158Q5T848 1215 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 NCBP2-AS2Q69YL0 99 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 MAB21L3Q8N8X9 362 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 NELL1Q92832 810 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 SLCO2A1Q92959 643 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 TCEAL4Q96EI5 215 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 MAGEB5Q9BZ81 275 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 EPC1Q9H2F5 836 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 RETREG1Q9H6L5 497 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 LTB4R2Q9NPC1 389 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 SNX10Q9Y5X0 201 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 RAD54BQ9Y620 910 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 CPQQ9Y646 472 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 TICRRQ7Z2Z1 1910 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 E9PAM4 449 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 LIASO43766 372 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 GREM1O60565 184 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 GJA1P17302 382 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 CEBPBP17676 345 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 ERCC2P18074 760 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 AMPD1P23109 780 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 EPHB2P29323 1055 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 CORO1AP31146 461 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 NR2C2P49116 596 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 DYNLT1P63172 113 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 AUHQ13825 339 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 DHX34Q14147 1143 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 GLE1Q53GS7 698 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 FAM133BQ5BKY9 247 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 PPM1JQ5JR12 505 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 TEX35Q5T0J7 233 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 STXBP5Q5T5C0 1151 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 C8orf74Q6P047 294 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 Q6ZNB5 142 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 FAM217AQ8IXS0 508 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 KIAA1958Q8N8K9 716 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 ACTL9Q8TC94 416 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 ING5Q8WYH8 240 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 FGF13Q92913 245 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 KRT12Q99456 494 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 PLA2G2FQ9BZM2 168 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 DDX47Q9H0S4 455 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 CATSPERBQ9H7T0 1116 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 STIM2Q9P246 746 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 LSM7Q9UK45 103 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 FBXO4Q9UKT5 387 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 CDH7Q9ULB5 785 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
SLIRP-212ENST00000613856 PCDHGA2Q9Y5H1 932 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 NUP205Q92621 2012 aa11.76□□□□□ -0.53
SLIRP-212ENST00000613856 DRGXA6NNA5 263 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 F5H5T6 163 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 MCF2LO15068 1137 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 DAPK3O43293 454 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 MFSD11O43934 449 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 GDF9O60383 454 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 KLKB1P03952 638 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 TDGF1P13385 188 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 PECAM1P16284 738 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 TACR2P21452 398 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 SERPINB6P35237 376 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 AVPR1AP37288 418 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 GGCXP38435 758 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 OTUD4Q01804 1114 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 LMNB2Q03252 620 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 USP4Q13107 963 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 MTAPQ13126 283 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 XRCC4Q13426 336 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 OASLQ15646 514 aaKnown RBP11.75□□□□□ -0.53
SLIRP-212ENST00000613856 RAP1GAP2Q684P5 730 aa11.75□□□□□ -0.53
SLIRP-212ENST00000613856 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms