RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CYP4V2Q6ZWL3 525 aaPredicted RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 POLNQ7Z5Q5 900 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 DAAM2Q86T65 1068 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 MAP7D3Q8IWC1 876 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 RHOT1Q8IXI2 618 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 CHPFQ8IZ52 775 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 ALLCQ8N6M5 410 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 RTL3Q8N8U3 475 aaKnown RBP13.63□□□□□ -0.23
MDC1-209ENST00000613547 PRRX2Q99811 253 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 TFR2Q9UP52 801 aa13.63□□□□□ -0.23
MDC1-209ENST00000613547 ILVBLA1L0T0 632 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 RCCD1A6NED2 376 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 BUB1O43683 1085 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 KLF8O95600 359 aaPredicted RBP13.62□□□□□ -0.23
MDC1-209ENST00000613547 HNRNPLP14866 589 aaKnown RBP eCLIP13.62□□□□□ -0.23
MDC1-209ENST00000613547 TCF4P15884 667 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 NNMTP40261 264 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 CXCL12P48061 93 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 CDH6P55285 790 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 CCZ1BP86790 482 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
MDC1-209ENST00000613547 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 PDK2Q15119 407 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 EGFLAMQ63HQ2 1017 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 SYT13Q7L8C5 426 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 ADIPOR2Q86V24 386 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 C1orf210Q8IVY1 113 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 SFTPA1Q8IWL2 248 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 IL17RCQ8NAC3 791 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 KCTD6Q8NC69 237 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 TPCN2Q8NHX9 752 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
MDC1-209ENST00000613547 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 C2orf49Q9BVC5 232 aaPredicted RBP13.62□□□□□ -0.23
MDC1-209ENST00000613547 MAGEB5Q9BZ81 275 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 LACRTQ9GZZ8 138 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 RCOR3Q9P2K3 495 aaPredicted RBP13.62□□□□□ -0.23
MDC1-209ENST00000613547 SLC8A2Q9UPR5 921 aa13.62□□□□□ -0.23
MDC1-209ENST00000613547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
MDC1-209ENST00000613547 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 ZBTB24O43167 697 aaPredicted RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 RAMP2O60895 175 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 GOT1P17174 413 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 COMTP21964 271 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 NTSR1P30989 418 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 TAS2R40P59535 323 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 GNA12Q03113 381 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 STARD3Q14849 445 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 EMC10Q5UCC4 262 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 TMEM215Q68D42 235 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 SYCE1Q8N0S2 351 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 DCAF4L2Q8NA75 395 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 TXNDC5Q8NBS9 432 aaKnown RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 KIAA1524Q8TCG1 905 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 LMLNQ96KR4 655 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 CALN1Q9BXU9 219 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 MAGEH1Q9H213 219 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 PCDH18Q9HCL0 1135 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 THAP10Q9P2Z0 257 aaPredicted RBP13.61□□□□□ -0.23
MDC1-209ENST00000613547 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 SLC25A13Q9UJS0 675 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 MMP17Q9ULZ9 603 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 NEU3Q9UQ49 428 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 ALG6Q9Y672 507 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 DUSP10Q9Y6W6 482 aa13.61□□□□□ -0.23
MDC1-209ENST00000613547 TRIOO75962 3097 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 LRRD1A4D1F6 860 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 WASH4PA8MWX3 477 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 PSTPIP1O43586 416 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 KRT1P04264 644 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 SRPRAP08240 638 aaKnown RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 TNNT1P13805 278 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 HOXB2P14652 356 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 ERCC2P18074 760 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 DGKEP52429 567 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 YBEYP58557 167 aaPredicted RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 ECT2LQ008S8 904 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 GAS6Q14393 721 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 ZNF234Q14588 700 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 PARP15Q460N3 678 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 TXNRD3NBQ6F5E7 133 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 APCDD1Q8J025 514 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
MDC1-209ENST00000613547 LZTR1Q8N653 840 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 KDM1BQ8NB78 822 aa13.6□□□□□ -0.23
MDC1-209ENST00000613547 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms