RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 UNC93AQ86WB7 457 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 TLR10Q9BXR5 811 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 OSBPL6Q9BZF3 934 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 RERGLQ9H628 205 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 DDX18Q9NVP1 670 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 MRPL39Q9NYK5 338 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 TRPC4Q9UBN4 977 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CNTNAP2Q9UHC6 1331 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PSMD12O00232 456 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CELF2O95319 508 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 MGAT1P26572 445 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 FAM187BQ17R55 369 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PAGE2BQ5JRK9 111 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 DSG4Q86SJ6 1040 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CDH24Q86UP0 819 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 EXOC3L1Q86VI1 746 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 MSL3Q8N5Y2 521 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PCDHGC5Q9Y5F6 944 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PAICSP22234 425 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 GTF2E2P29084 291 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 NEDD8Q15843 81 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 FBXO16Q8IX29 292 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 SPPL2AQ8TCT8 520 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 TATDN2Q93075 761 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CCDC3Q9BQI4 270 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ROGDIQ9GZN7 287 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CLTCQ00610 1675 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 CXCL11O14625 94 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 GRIK4Q16099 956 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 INTS11Q5TA45 600 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 FAM117BQ6P1L5 589 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 LRRC49Q8IUZ0 686 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 UTP15Q8TED0 518 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PNMA5Q96PV4 448 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 SEPHS2Q99611 448 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 IL22Q9GZX6 179 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 EFCAB10A6NFE3 127 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 FEN1P39748 380 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 POU6F1Q14863 301 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 INTS5Q6P9B9 1019 aaKnown RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ZNF662Q6ZS27 426 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ADHFE1Q8IWW8 467 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ETNPPLQ8TBG4 499 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 UBE2E3Q969T4 207 aa17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 PRMT6Q96LA8 375 aaPredicted RBP17.72■□□□□ 0.43
HMGXB3-206ENST00000613459 ZC3H13Q5T200 1668 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 H3BRB1 525 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ALOX12P18054 663 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 RPL14P50914 215 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 DMPKQ09013 629 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 MOSPD2Q8NHP6 518 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 WDR48Q8TAF3 677 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 TUT1Q9H6E5 874 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 C2CD2LO14523 706 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 INPP4BO15327 924 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 HS6ST1O60243 411 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 CHN2P52757 468 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 POLR2LP62875 67 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 CYP2A13Q16696 494 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 FUKQ8N0W3 1084 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ACMSDQ8TDX5 336 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 EPB41L4BQ9H329 900 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 TBC1D12O60347 775 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 CKBP12277 381 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ATP4AP20648 1035 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 GPR15P49685 360 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ALFQ53S48 1182 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 C2CD6Q53TS8 623 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 MFSD4BQ5TF39 518 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ARHGEF19Q8IW93 802 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 METTL6Q8TCB7 284 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 SERAC1Q96JX3 654 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 POPDC2Q9HBU9 364 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 ATP13A1Q9HD20 1204 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 CYLDQ9NQC7 956 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 VAV3Q9UKW4 847 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 GTF2A1LQ9UNN4 478 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 PCDHB12Q9Y5F1 795 aa17.71■□□□□ 0.43
HMGXB3-206ENST00000613459 DDX3XO00571 662 aaKnown RBP eCLIP17.71■□□□□ 0.421e-22■■■□□ 19
HMGXB3-206ENST00000613459 MYL12BO14950 172 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 MAP3K6O95382 1288 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 DGKAP23743 735 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 TUBP50607 506 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ADIGQ0VDE8 80 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 KLHL12Q53G59 568 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF618Q5T7W0 954 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF470Q6ECI4 717 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 TTC27Q6P3X3 843 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ZDHHC13Q8IUH4 622 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF614Q8N883 585 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 ITFG1Q8TB96 612 aa17.71■□□□□ 0.42
HMGXB3-206ENST00000613459 PRR23AA6NEV1 266 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 OTOP1Q7RTM1 612 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 KRT74Q7RTS7 529 aa17.7■□□□□ 0.42
HMGXB3-206ENST00000613459 ZNF605Q86T29 641 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms