RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 PARVAQ9NVD7 372 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 USP36Q9P275 1121 aaKnown RBP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 NUP205Q92621 2012 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 C2CD4BA6NLJ0 364 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 TMCO5BA8MYB1 307 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 SYPP08247 313 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 TPMTP51580 245 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 PLK1P53350 603 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 LIMK1P53667 647 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 AIF1P55008 147 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 CCDC15Q0P6D6 951 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 SF3A2Q15428 464 aaKnown RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 TRIM61Q5EBN2 209 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 RWDD4Q6NW29 188 aaKnown RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF783Q6ZMS7 281 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF366Q8N895 744 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 FAM172AQ8WUF8 416 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 IGSF8Q969P0 613 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 RMDN1Q96DB5 314 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 TOE1Q96GM8 510 aaKnown RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 MCEEQ96PE7 176 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 OMDQ99983 421 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 NCAPGQ9BPX3 1015 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 GPR174Q9BXC1 333 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 BTBD1Q9H0C5 482 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 SLC6A17Q9H1V8 727 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 HAUS4Q9H6D7 363 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 MRPL47Q9HD33 250 aaKnown RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 PRSS16Q9NQE7 514 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 MBD1Q9UIS9 605 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 HPCAL4Q9UM19 191 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 SCINQ9Y6U3 715 aa12.68□□□□□ -0.38
CBWD3-208ENST00000612050 RIF1Q5UIP0 2472 aaKnown RBP12.68□□□□□ -0.38
CBWD3-208ENST00000612050 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 A0A1W2PQJ5 194 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 RNF8O76064 485 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 ENDOD1O94919 500 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 ADH1BP00325 375 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 MYBL1P10243 752 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 GZMAP12544 262 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 TGM1P22735 817 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 GGCXP38435 758 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 PRKCIP41743 596 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 PTGER3P43115 390 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF143P52747 638 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 COPAP53621 1224 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 C15orf59Q2T9L4 293 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 C5orf22Q49AR2 442 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 FAM46CQ5VWP2 391 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 RETSATQ6NUM9 610 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 USP30Q70CQ3 517 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 MON1BQ7L1V2 547 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 IRF2BP2Q7Z5L9 587 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 SLFN11Q7Z7L1 901 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 FAM124AQ86V42 546 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 MCOLN2Q8IZK6 566 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 APCDD1Q8J025 514 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 DEFB119Q8N690 84 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 OR8D1Q8WZ84 308 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 BAP1Q92560 729 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 MYEOVQ96EZ4 313 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 FEM1AQ9BSK4 669 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 CNPY3Q9BT09 278 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 SGK2Q9HBY8 427 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 TMEM9BQ9NQ34 198 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 IFNKQ9P0W0 207 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 PPARGC1AQ9UBK2 798 aaKnown RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 OR12D3Q9UGF7 316 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 INTS6Q9UL03 887 aaKnown RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 SLC6A14Q9UN76 642 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 TBC1D30Q9Y2I9 924 aa12.67□□□□□ -0.38
CBWD3-208ENST00000612050 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
CBWD3-208ENST00000612050 OTOGLQ3ZCN5 2332 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 VPS13AQ96RL7 3174 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 SLC30A4O14863 429 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 SIN3BO75182 1162 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 RTN2O75298 545 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 IGLV3-19P01714 112 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms