RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 TMCO3Q6UWJ1 677 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 ARHGAP36Q6ZRI8 547 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 BBS12Q6ZW61 710 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 CHST9Q7L1S5 443 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 VSIG1Q86XK7 387 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.38□□□□□ -0.43
CLK4-215ENST00000611733 LMLNQ96KR4 655 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 C10orf88Q9H8K7 445 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 HEBP1Q9NRV9 189 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 TBC1D30Q9Y2I9 924 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
CLK4-215ENST00000611733 HOXC11O43248 304 aaPredicted RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 TULP3O75386 442 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 CISD3P0C7P0 127 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 HTR7P34969 479 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 LMAN2Q12907 356 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 PAFAH1B3Q15102 231 aaKnown RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 LONRF2Q1L5Z9 754 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 RNF219Q5W0B1 726 aaPredicted RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 APCDD1Q8J025 514 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 DTLQ9NZJ0 730 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 FBXO10Q9UK96 956 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 INTS6Q9UL03 887 aaKnown RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 CACNG3O60359 315 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 GLDCP23378 1020 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 CSKP41240 450 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 CDH18Q13634 790 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 TFDP2Q14188 446 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 TTC39BQ5VTQ0 682 aaPredicted RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 AFMIDQ63HM1 303 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 UMODL1-AS1Q8N2C9 162 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 KIF18AQ8NI77 898 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 CSGALNACT1Q8TDX6 532 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 C1orf54Q8WWF1 131 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ALG14Q96F25 216 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 LRRC19Q9H756 370 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
CLK4-215ENST00000611733 EFR3BQ9Y2G0 817 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 VCANP13611 3396 aa12.37□□□□□ -0.43
CLK4-215ENST00000611733 DOCK4Q8N1I0 1966 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 RASA4BC9J798 803 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 DFFAO00273 331 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 RASA4O43374 803 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 TJP3O95049 919 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 TUBB4AP04350 444 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 RHOCP08134 193 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 CETN2P41208 172 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 OTUD4Q01804 1114 aaKnown RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 GEN1Q17RS7 908 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 ACTL9Q8TC94 416 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 FEM1AQ9BSK4 669 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 CES2O00748 559 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 SRFP11831 508 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 GALK1P51570 392 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 GNA12Q03113 381 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 KDSRQ06136 332 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 NR1H3Q13133 447 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 POLD3Q15054 466 aaPredicted RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 CCDC181Q5TID7 509 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 SETD3Q86TU7 594 aaPredicted RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 LGMNQ99538 433 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 SPON2Q9BUD6 331 aa12.36□□□□□ -0.43
CLK4-215ENST00000611733 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
CLK4-215ENST00000611733 ILVBLA1L0T0 632 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 J3KR12 359 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 SNAP91O60641 907 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 RAMP2O60895 175 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 CD72P21854 359 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 DGKGP49619 791 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 SNX1Q13596 522 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 FUT11Q495W5 492 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 GJD3Q8N144 294 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
CLK4-215ENST00000611733 P3H4Q92791 437 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms