RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 VCX3AQ9NNX9 186 aa20.87■□□□□ 0.93
SSBP3-216ENST00000610401 COL11A1P12107 1806 aaPredicted RBP20.86■□□□□ 0.93
SSBP3-216ENST00000610401 M0QYT0 321 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 IL18RAPO95256 599 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 PIGNO95427 931 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 C2P06681 752 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 ZNF670Q9BS34 389 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 DMAP1Q9NPF5 467 aaPredicted RBP20.86■□□□□ 0.93
SSBP3-216ENST00000610401 ANLNQ9NQW6 1124 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 SF3B1O75533 1304 aaKnown RBP eCLIP20.86■□□□□ 0.934e-6■■■■■ 89.5
SSBP3-216ENST00000610401 NEMP2A6NFY4 417 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 H3BNX3 289 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 GCATO75600 419 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 LSM12Q3MHD2 195 aaKnown RBP20.86■□□□□ 0.93
SSBP3-216ENST00000610401 SYPL2Q5VXT5 272 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 AMIGO2Q86SJ2 522 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 DSELQ8IZU8 1212 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 ACTRT2Q8TDY3 377 aa20.86■□□□□ 0.93
SSBP3-216ENST00000610401 C9JVG2 144 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 HNRNPLP14866 589 aaKnown RBP eCLIP20.85■□□□□ 0.933e-24■■■■■ 36.5
SSBP3-216ENST00000610401 PIK3R1P27986 724 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ICAM3P32942 547 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 FDFT1P37268 417 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 SCNN1BP51168 640 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 RALGDSQ12967 914 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ART3Q13508 389 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 PITRM1Q5JRX3 1037 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 SNRNP27Q8WVK2 155 aaKnown RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 KLRG1Q96E93 195 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 EIF2AQ9BY44 585 aaKnown RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 GPAMQ9HCL2 828 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 PREBQ9HCU5 417 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 USP46P62068 366 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 COG7P83436 770 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 POU5F1BQ06416 359 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 TTLL12Q14166 644 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 NADK2Q4G0N4 442 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ARL13AQ5H913 290 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 FAM43BQ6ZT52 329 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 HFE2Q6ZVN8 426 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 MCUQ8NE86 351 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 CXorf38Q8TB03 319 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 KCTD4Q8WVF5 259 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 FAM192AQ9GZU8 254 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ELP3Q9H9T3 547 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 AP4B1Q9Y6B7 739 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 DNAJA2O60884 412 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 CTBP1Q13363 440 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ANKRD20A4Q4UJ75 823 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 CELF3Q5SZQ8 465 aaKnown RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 PQLC1Q8N2U9 271 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 OPTNQ96CV9 577 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 TIMM13Q9Y5L4 95 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-216ENST00000610401 ANKRD12Q6UB98 2062 aa20.85■□□□□ 0.93
SSBP3-216ENST00000610401 SCN1AP35498 2009 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 ZNF195O14628 629 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 CCNT2O60583 730 aaKnown RBP20.84■□□□□ 0.93
SSBP3-216ENST00000610401 GP5P40197 560 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 GRIA4P48058 902 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 GRM1Q13255 1194 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 VGLL4Q14135 290 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 SLC35F5Q8WV83 523 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 LRRC39Q96DD0 335 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 FAM167AQ96KS9 214 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 CDH19Q9H159 772 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 IL1RL2Q9HB29 575 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 NMRAL1Q9HBL8 299 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 GMPR2Q9P2T1 348 aaKnown RBP20.84■□□□□ 0.93
SSBP3-216ENST00000610401 ZDHHC2Q9UIJ5 367 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 BEST1O76090 585 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 PGAM1P18669 254 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 ETFBP38117 255 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 MAGEA3P43357 314 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 NIPAL4Q0D2K0 466 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 SEMA5AQ13591 1074 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 QKIQ96PU8 341 aaKnown RBP eCLIP20.84■□□□□ 0.93
SSBP3-216ENST00000610401 PKP2Q99959 881 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 C1orf21Q9H246 121 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 GTSE1Q9NYZ3 720 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 TLL2Q9Y6L7 1015 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 ARID2Q68CP9 1835 aa20.84■□□□□ 0.93
SSBP3-216ENST00000610401 KLHL33A6NCF5 533 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 CRTAMO95727 393 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 OAZ1P54368 228 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 PRAMEP78395 509 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 CDKL1Q00532 357 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 RNF139Q8WU17 664 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 ITGA11Q9UKX5 1188 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 VANGL2Q9ULK5 521 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 GNEQ9Y223 722 aaKnown RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 RUVBL2Q9Y230 463 aaKnown RBP20.83■□□□□ 0.93
SSBP3-216ENST00000610401 ATP6AP2A0A1C7CYW4 349 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 IRF6O14896 467 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 ATP6AP2O75787 350 aa20.83■□□□□ 0.93
SSBP3-216ENST00000610401 DPP6P42658 865 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms