RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 ADAMTS1Q9UHI8 967 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 RAB23Q9ULC3 237 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 A0A087X0T9 212 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 IGHV1OR15-9A0A0B4J2B8 117 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 TMEM191CA6NGB0 347 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 TTC34A8MYJ7 566 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 CLDN11O75508 207 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 EPN2O95208 641 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ASLP04424 464 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 FAM228BP0C875 321 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 SPEM2Q0P670 501 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 STARD3Q14849 445 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 TDRD12Q587J7 1177 aaKnown RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 RNF219Q5W0B1 726 aaPredicted RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 PMS2CLQ68D20 193 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 SPECC1LQ69YQ0 1117 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 TMPRSS6Q8IU80 811 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 RPL10LQ96L21 214 aaKnown RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 CNPY3Q9BT09 278 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 OSBPL2Q9H1P3 480 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 CNOT8Q9UFF9 292 aaKnown RBP13.12□□□□□ -0.31
CD9-212ENST00000610354 PLA2G4CQ9UP65 541 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
CD9-212ENST00000610354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
CD9-212ENST00000610354 CEP250Q9BV73 2442 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 PI4KAP42356 2102 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 ECT2LQ008S8 904 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 SCAPQ12770 1279 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 TBX2Q13207 712 aaPredicted RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 CCDC6Q16204 474 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 C9orf64Q5T6V5 341 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 DCUN1D2Q6PH85 259 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 KIAA1324Q6UXG2 1013 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 METTL3Q86U44 580 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 CCDC117Q8IWD4 279 aaPredicted RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 NTAN1Q96AB6 310 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 ARRDC1-AS1Q9H2J1 176 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 PRDM16Q9HAZ2 1276 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 OR12D3Q9UGF7 316 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 GMEB2Q9UKD1 530 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 FZD10Q9ULW2 581 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 CYP8B1Q9UNU6 501 aa13.11□□□□□ -0.31
CD9-212ENST00000610354 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
CD9-212ENST00000610354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 A0A0D9SEW6 157 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 SNAP91O60641 907 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 SIN3BO75182 1162 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 LRIG2O94898 1065 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 MOCS3O95396 460 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 TPM3P06753 285 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 VAV1P15498 845 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 EIF4A3P38919 411 aaKnown RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 RPS14P62263 151 aaKnown RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 E2F5Q15329 346 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 SCYL2Q6P3W7 929 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 CYP4V2Q6ZWL3 525 aaPredicted RBP13.1□□□□□ -0.31
CD9-212ENST00000610354 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 DRC7Q8IY82 874 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 DEFB119Q8N690 84 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 KDM1BQ8NB78 822 aa13.1□□□□□ -0.31
CD9-212ENST00000610354 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms