RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 USP24Q9UPU5 2620 aa19.78■□□□□ 0.76
SRSF4-206ENST00000605204 FAM170AA1A519 330 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 E9PAM4 449 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 DCLK1O15075 740 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 RTN2O75298 545 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 IGLV3-19P01714 112 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 OXTRP30559 389 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 ADRA1BP35368 520 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 HOXD12P35452 270 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 SCAPQ12770 1279 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 HNRNPA1L2Q32P51 320 aaKnown RBP19.77■□□□□ 0.76
SRSF4-206ENST00000605204 WDR59Q6PJI9 974 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 ZNF783Q6ZMS7 281 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 CIR1Q86X95 450 aaPredicted RBP19.77■□□□□ 0.76
SRSF4-206ENST00000605204 XPO4Q9C0E2 1151 aaKnown RBP19.77■□□□□ 0.76
SRSF4-206ENST00000605204 MKRN2Q9H000 416 aaKnown RBP19.77■□□□□ 0.76
SRSF4-206ENST00000605204 OSBPL2Q9H1P3 480 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 ANLNQ9NQW6 1124 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 VPS45Q9NRW7 570 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 SEMA4GQ9NTN9 838 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 USP36Q9P275 1121 aaKnown RBP19.77■□□□□ 0.76
SRSF4-206ENST00000605204 ERVW-1Q9UQF0 538 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 SCINQ9Y6U3 715 aa19.77■□□□□ 0.76
SRSF4-206ENST00000605204 TARSL2A2RTX5 802 aaKnown RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 I6L893 689 aaPredicted RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 KRT37O76014 449 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 GYPCP04921 128 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 TPM1P09493 284 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 ACADMP11310 421 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 MPLP40238 635 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 HDAC4P56524 1084 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 SFSWAPQ12872 951 aaKnown RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 C15orf59Q2T9L4 293 aaPredicted RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 SPECC1LQ69YQ0 1117 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 PLEKHA7Q6IQ23 1121 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 PRR23CQ6ZRP0 262 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 RLN3Q8WXF3 142 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 NCAPGQ9BPX3 1015 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 FEM1AQ9BSK4 669 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 C2orf49Q9BVC5 232 aaPredicted RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 ZYG11BQ9C0D3 744 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 MRPL47Q9HD33 250 aaKnown RBP19.76■□□□□ 0.75
SRSF4-206ENST00000605204 SCML1Q9UN30 329 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 ATG2BQ96BY7 2078 aa19.76■□□□□ 0.75
SRSF4-206ENST00000605204 CFAP47Q6ZTR5 3102 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 IGHV1OR15-9A0A0B4J2B8 117 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 EDDM13A0A1B0GTR0 161 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.75■□□□□ 0.75
SRSF4-206ENST00000605204 BCLAF3A2AJT9 711 aaKnown RBP19.75■□□□□ 0.75
SRSF4-206ENST00000605204 DDX3XO00571 662 aaKnown RBP eCLIP19.75■□□□□ 0.758e-15■■■□□ 17.7
SRSF4-206ENST00000605204 GDF9O60383 454 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 FTLP02792 175 aaPredicted RBP19.75■□□□□ 0.75
SRSF4-206ENST00000605204 BCKDHBP21953 392 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 ETFBP38117 255 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 COPAP53621 1224 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 KRT83P78385 493 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 MAMLD1Q13495 774 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 CYP2U1Q7Z449 544 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 PHLDB2Q86SQ0 1253 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 C14orf80Q86SX3 495 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 NETO1Q8TDF5 533 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 FNIP1Q8TF40 1166 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 MRGPRX3Q96LB0 322 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 MUC3BQ9H195 1237 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 ISCUQ9H1K1 167 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 PCED1AQ9H1Q7 454 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 ITM2CQ9NQX7 267 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 TAS2R14Q9NYV8 317 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 SLC25A13Q9UJS0 675 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 VPS28Q9UK41 221 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 INVSQ9Y283 1065 aa19.75■□□□□ 0.75
SRSF4-206ENST00000605204 MUC22E2RYF6 1773 aaPredicted RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 CXorf51AA0A1B0GTR3 108 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 EIF3CLB5ME19 914 aaKnown RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 SLC30A4O14863 429 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 RNASEH1O60930 286 aaKnown RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 RHOCP08134 193 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 ZNF806P0C7X5 589 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 HLA-EP13747 358 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 CD6P30203 668 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 OR1E1P30953 314 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 HNRNPH3P31942 346 aaKnown RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 GGCXP38435 758 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 RPL6Q02878 288 aaKnown RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 TTC31Q49AM3 519 aaPredicted RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 EFHC2Q5JST6 749 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 PLA2G2CQ5R387 149 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 HGSNATQ68CP4 663 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 ZNF776Q68DI1 518 aaPredicted RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 RABEPKQ7Z6M1 372 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 APCDD1Q8J025 514 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 DCAF4L2Q8NA75 395 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 FOXJ1Q92949 421 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 MYO19Q96H55 970 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 EIF3CQ99613 913 aaKnown RBP19.74■□□□□ 0.75
SRSF4-206ENST00000605204 ARRDC1-AS1Q9H2J1 176 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 PRSS16Q9NQE7 514 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 OR12D3Q9UGF7 316 aa19.74■□□□□ 0.75
SRSF4-206ENST00000605204 MBD1Q9UIS9 605 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms