RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ADRA1BP35368 520 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 TPMTP51580 245 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF143P52747 638 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 COPAP53621 1224 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 AIF1P55008 147 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 FOXK2Q01167 660 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 NRG1Q02297 640 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF33AQ06730 810 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 CDO1Q16878 200 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 CCDC14Q49A88 953 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 CXorf57Q6NSI4 855 aaKnown RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 DSG4Q86SJ6 1040 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 CIR1Q86X95 450 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 FAM131BQ86XD5 332 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 FAM172AQ8WUF8 416 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 ERLEC1Q96DZ1 483 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 NCAPGQ9BPX3 1015 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 FEM1AQ9BSK4 669 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 NUSAP1Q9BXS6 441 aaKnown RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 TTYH3Q9C0H2 523 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 OSBPL2Q9H1P3 480 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 HAUS4Q9H6D7 363 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 EML5Q05BV3 1969 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 PLXND1Q9Y4D7 1925 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 GPR179Q6PRD1 2367 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MYO15AQ9UKN7 3530 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 FAM170AA1A519 330 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MEI4A8MW99 385 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 SRGAP2O75044 1071 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MZF1P28698 734 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 ZBED6P86452 979 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 TRIM14Q14142 442 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 ELAVL3Q14576 367 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 C15orf59Q2T9L4 293 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 TDRD12Q587J7 1177 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 TRNP1Q6NT89 227 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 USP30Q70CQ3 517 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 DGLUCYQ7Z3D6 616 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 PHLDB2Q86SQ0 1253 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 JOSD2Q8TAC2 188 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 RMDN1Q96DB5 314 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 TOE1Q96GM8 510 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF419Q96HQ0 510 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 HSPA12BQ96MM6 686 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MCEEQ96PE7 176 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 CNPY3Q9BT09 278 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 SYT11Q9BT88 431 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 SLC6A17Q9H1V8 727 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 MRPL47Q9HD33 250 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 DONSONQ9NYP3 566 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 WSB2Q9NYS7 404 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 OR12D3Q9UGF7 316 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 TPX2Q9ULW0 747 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
CCDC12-209ENST00000604164 SCINQ9Y6U3 715 aa11.87□□□□□ -0.51
CCDC12-209ENST00000604164 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SLC30A4O14863 429 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 RTN2O75298 545 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ADH1BP00325 375 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SERPING1P05155 500 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 TPM1P09493 284 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 PBX1P40424 430 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 PTGER3P43115 390 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 MAPKAPK2P49137 400 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 CLCN6P51797 869 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
CCDC12-209ENST00000604164 RPS14P62263 151 aaKnown RBP11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SCAPQ12770 1279 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
CCDC12-209ENST00000604164 CCDC6Q16204 474 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ACCSLQ4AC99 568 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 C9orf64Q5T6V5 341 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 FAM46CQ5VWP2 391 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 PEAR1Q5VY43 1037 aaPredicted RBP11.86□□□□□ -0.51
CCDC12-209ENST00000604164 RETSATQ6NUM9 610 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ARMCX6Q7L4S7 300 aa11.86□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF571Q7Z3V5 609 aaPredicted RBP11.86□□□□□ -0.51
CCDC12-209ENST00000604164 SLFN11Q7Z7L1 901 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms