RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SOX5P35711 763 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 NNMTP40261 264 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 PSMD8P48556 350 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 CXCR3P49682 368 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
TUBE1-206ENST00000603722 OXCT1P55809 520 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 JAM2P57087 298 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 FOXC1Q12948 553 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 ZNF177Q13360 481 aaPredicted RBP16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SYCP1Q15431 976 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SLC25A52Q3SY17 297 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 BRMS1LQ5PSV4 323 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 CCDC183Q5T5S1 534 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 PIP4P1Q86T03 277 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 ZNF677Q86XU0 584 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 STK40Q8N2I9 435 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 NT5C3BQ969T7 300 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 PGAP3Q96FM1 320 aaPredicted RBP16.86■□□□□ 0.29
TUBE1-206ENST00000603722 PCMTD1Q96MG8 357 aaPredicted RBP16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SPAG5Q96R06 1193 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 ZDHHC5Q9C0B5 715 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SCML1Q9UN30 329 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SIK3Q9Y2K2 1263 aa16.86■□□□□ 0.29
TUBE1-206ENST00000603722 SPTBN2O15020 2390 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 FAM47DPA6NHR8 397 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 LGALS16A8MUM7 142 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 UPK3BL1B0FP48 263 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 UPK3BL2E5RIL1 263 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 CLDN11O75508 207 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 RNASEH2AO75792 299 aaKnown RBP16.85■□□□□ 0.29
TUBE1-206ENST00000603722 CNTN5O94779 1100 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 MBD3O95983 291 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 F9P00740 461 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 CD59P13987 128 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 VAV1P15498 845 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 SHC2P98077 582 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 FMO1Q01740 532 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 CDR2Q01850 454 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 SULT2A1Q06520 285 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 TRNP1Q6NT89 227 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 C1orf216Q8TAB5 229 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 PTPRN2Q92932 1015 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 BIRC7Q96CA5 298 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 CFAP57Q96MR6 1250 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 METTL5Q9NRN9 209 aaKnown RBP16.85■□□□□ 0.29
TUBE1-206ENST00000603722 TMPRSS4Q9NRS4 437 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
TUBE1-206ENST00000603722 VPS28Q9UK41 221 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 PAXBP1Q9Y5B6 917 aa16.85■□□□□ 0.29
TUBE1-206ENST00000603722 SPAARA0A1B0GVQ0 90 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 GJB3O75712 270 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 IL1BP01584 269 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 ZNF18P17022 549 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 CHRNB2P17787 502 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 SLC8A1P32418 973 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 RDXP35241 583 aaKnown RBP16.84■□□□□ 0.29
TUBE1-206ENST00000603722 STAT1P42224 750 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 AFF3P51826 1226 aaKnown RBP16.84■□□□□ 0.29
TUBE1-206ENST00000603722 PLK1P53350 603 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 CDH4P55283 916 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 BNC1Q01954 994 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 ELAVL3Q14576 367 aaKnown RBP16.84■□□□□ 0.29
TUBE1-206ENST00000603722 C5orf22Q49AR2 442 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 ALFQ53S48 1182 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 LAYNQ6UX15 382 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 PHLDB2Q86SQ0 1253 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 EMC1Q8N766 993 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 FRS2Q8WU20 508 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 ALG14Q96F25 216 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 CAMK1GQ96NX5 476 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 FAM129BQ96TA1 746 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 OMDQ99983 421 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 FEM1AQ9BSK4 669 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 MUC3BQ9H195 1237 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 NEUROG2Q9H2A3 272 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 IL21RQ9HBE5 538 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 TM9SF3Q9HD45 589 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 SLC25A13Q9UJS0 675 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 DAAM1Q9Y4D1 1078 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 PCDH15Q96QU1 1955 aa16.84■□□□□ 0.29
TUBE1-206ENST00000603722 A0A1B0GVT2 93 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 SH3BP5O60239 455 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 ADH1BP00325 375 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 CYP1A1P04798 512 aaPredicted RBP16.83■□□□□ 0.28
TUBE1-206ENST00000603722 IGHV4-34P06331 123 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 RHOCP08134 193 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 SPINK2P20155 84 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
TUBE1-206ENST00000603722 MMP8P22894 467 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 CD27P26842 260 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 SIM1P81133 766 aaPredicted RBP16.83■□□□□ 0.28
TUBE1-206ENST00000603722 UBXN1Q04323 297 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
TUBE1-206ENST00000603722 SLC14A1Q13336 389 aa16.83■□□□□ 0.28
TUBE1-206ENST00000603722 CKAP5Q14008 2032 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms