RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 POU4F3Q15319 338 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 MYLK3Q32MK0 819 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PDPK2PQ6A1A2 396 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 SP8Q8IXZ3 490 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GLB1L3Q8NCI6 653 aaPredicted RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 SPATA20Q8TB22 786 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 TSPEARQ8WU66 669 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 AUTS2Q8WXX7 1259 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 FER1L6-AS2Q96M78 137 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NSUN5Q96P11 429 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 HHIPQ96QV1 700 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 HEPHQ9BQS7 1158 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 SPXQ9BT56 116 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NTMT1Q9BV86 223 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GON7Q9BXV9 100 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 FRMD8P1Q9BZ68 369 aaPredicted RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 SUV39H2Q9H5I1 410 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 EPS8L2Q9H6S3 715 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PSTPIP2Q9H939 334 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CNGB3Q9NQW8 809 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 STK32BQ9NY57 414 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 IGSF9Q9P2J2 1179 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 LARSQ9P2J5 1176 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PI4KBQ9UBF8 816 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 AFF4Q9UHB7 1163 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 AGAP1Q9UPQ3 857 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 ARHGEF10O15013 1369 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 A0A088AWK7 358 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC9B1P1A6NJY1 282 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 TMEM114B3SHH9 223 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 H3BML4 177 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 FBP2O00757 339 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 NRG2O14511 850 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 YKT6O15498 198 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 TLR2O60603 784 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 GAS7O60861 476 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PSMD10O75832 226 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 TSPAN9O75954 239 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 KCNK5O95279 499 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 LMNAP02545 664 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 HMGCRP04035 888 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 EPHX1P07099 455 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ADCY8P40145 1251 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 EIF4A1P60842 406 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 GNG11P61952 73 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 RPP38P78345 283 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ATP8B2P98198 1209 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 TRAP1Q12931 704 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 CHAF1BQ13112 559 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 COTL1Q14019 142 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 CYLC2Q14093 348 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 MED22Q15528 200 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF124Q15973 351 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 AAK1Q2M2I8 961 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 FUT11Q495W5 492 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 CDONQ4KMG0 1287 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PAPD4Q6PIY7 484 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 TSPYL5Q86VY4 417 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 FIBINQ8TAL6 211 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 FNDC8Q8TC99 324 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC5A5Q92911 643 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 FAM136AQ96C01 138 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 WRNIP1Q96S55 665 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 CITED2Q99967 270 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ZKSCAN3Q9BRR0 538 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 LRRC3Q9BY71 257 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PRDM13Q9H4Q3 707 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 NTN4Q9HB63 628 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 MRPL47Q9HD33 250 aaKnown RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHB16Q9NRJ7 776 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ZFP57Q9NU63 452 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 EMC3Q9P0I2 261 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 UBA2Q9UBT2 640 aaPredicted RBP5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 AMACRQ9UHK6 382 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC12A4Q9UP95 1085 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHB4Q9Y5E5 795 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHA8Q9Y5H6 950 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ZHX2Q9Y6X8 837 aa5.15□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKARQ7Z5J8 1434 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 KIAA0355O15063 1070 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 ASNA1O43681 348 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 PFKFB2O60825 505 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 NIPSNAP2O75323 286 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 OR5F1O95221 314 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 AOAHP28039 575 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNC1P48547 511 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 ATXN3P54252 364 aaPredicted RBP5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 RAD23AP54725 363 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 EIF3EP60228 445 aaKnown RBP5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 RELAQ04206 551 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 ASPHQ12797 758 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 RALGDSQ12967 914 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 TRA2AQ13595 282 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 HNRNPDQ14103 355 aaKnown RBP5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 NONOQ15233 471 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 SPRED3Q2MJR0 410 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 XKR3Q5GH77 459 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 TCTE1Q5JU00 501 aa5.15□□□□□ -1.59
SPTBN1-206ENST00000602898 SV2BQ7L1I2 683 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms