RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 NUMBP49757 651 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 UBASH3AP57075 661 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 ACAD10Q6JQN1 1059 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 DNAJC24Q6P3W2 148 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 FOXJ1Q92949 421 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 RPL10LQ96L21 214 aaKnown RBP22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 HSPA12BQ96MM6 686 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 NUP58Q9BVL2 599 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 EDEM3Q9BZQ6 932 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 TMEM74BQ9NUR3 256 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 WSB2Q9NYS7 404 aaPredicted RBP22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 AIPL1Q9NZN9 384 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 SLCO3A1Q9UIG8 710 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 ANKRD62A6NC57 917 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SIGLEC16A6NMB1 481 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 DRGXA6NNA5 263 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 TTC34A8MYJ7 566 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 E9PAM4 449 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SLC30A4O14863 429 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 RNASEH1O60930 286 aaKnown RBP22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SRGAP2O75044 1071 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SIN3BO75182 1162 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 IGLV3-19P01714 112 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 DNTTP04053 509 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 PTPN9P43378 593 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 RPS14P62263 151 aaKnown RBP22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ZBTB16Q05516 673 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ARID5BQ14865 1188 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ARL13BQ3SXY8 428 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ALFQ53S48 1182 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SH3PXD2AQ5TCZ1 1133 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ZNF776Q68DI1 518 aaPredicted RBP22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 PPP1R2P3Q6NXS1 205 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 STRADAQ7RTN6 431 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 SLC41A1Q8IVJ1 513 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ZNF683Q8IZ20 524 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ZNF419Q96HQ0 510 aaPredicted RBP22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 FEM1AQ9BSK4 669 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 GPR174Q9BXC1 333 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 MUC3BQ9H195 1237 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 VPS28Q9UK41 221 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 PILRBQ9UKJ0 227 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 TBC1D30Q9Y2I9 924 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 ATXN2Q99700 1313 aaKnown RBP22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 CACNA1AO00555 2505 aa22.51■■□□□ 1.19
PPFIA3-208ENST00000602726 LAMA1P25391 3075 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 EDDM13A0A1B0GTR0 161 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 TARSL2A2RTX5 802 aaKnown RBP22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 PATE3B3GLJ2 98 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 RHOCP08134 193 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 GPD1P21695 349 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 HOXD12P35452 270 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 STK19P49842 368 aaPredicted RBP22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 LIMK1P53667 647 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 TRIM61Q5EBN2 209 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 SYCP2LQ5T4T6 812 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 WDR59Q6PJI9 974 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 LRSAM1Q6UWE0 723 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 ERMP1Q7Z2K6 904 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 FAM124AQ86V42 546 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 MCOLN2Q8IZK6 566 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 OR52K2Q8NGK3 314 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 FAM172AQ8WUF8 416 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 ALG14Q96F25 216 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 SYT11Q9BT88 431 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 EDEM2Q9BV94 578 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 TTYH3Q9C0H2 523 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 RSPH9Q9H1X1 276 aaPredicted RBP22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 HAUS4Q9H6D7 363 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 MPP6Q9NZW5 540 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 ITIH6Q6UXX5 1313 aa22.5■■□□□ 1.19
PPFIA3-208ENST00000602726 PI4KAP42356 2102 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 IGLV3-10A0A075B6K4 115 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 TMCO5BA8MYB1 307 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 C7P10643 843 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 ADRA1BP35368 520 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 KLHL30Q0D2K2 578 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 TTC31Q49AM3 519 aaPredicted RBP22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 RAB6CQ53S08 254 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 FIGNQ5HY92 759 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 C9orf64Q5T6V5 341 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 STPG1Q5TH74 334 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 IL31Q6EBC2 164 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 TFAP2DQ7Z6R9 452 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 SETD3Q86TU7 594 aaPredicted RBP22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 RGL4Q8IZJ4 473 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 CADM4Q8NFZ8 388 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 CEP76Q8TAP6 659 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 CENPIQ92674 756 aaPredicted RBP22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 NUSAP1Q9BXS6 441 aaKnown RBP22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 RAB6CQ9H0N0 254 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 TAS2R14Q9NYV8 317 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 SLC25A13Q9UJS0 675 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 OR51B4Q9Y5P0 310 aa22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 TNRC6BQ9UPQ9 1833 aaKnown RBP22.49■■□□□ 1.19
PPFIA3-208ENST00000602726 LNP1A1A4G5 178 aa22.48■■□□□ 1.19
PPFIA3-208ENST00000602726 CFIP05156 583 aa22.48■■□□□ 1.19
PPFIA3-208ENST00000602726 RRM1P23921 792 aa22.48■■□□□ 1.19
PPFIA3-208ENST00000602726 IRX4P78413 519 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms