RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 NUCKS1Q9H1E3 243 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-227ENST00000602011 GDF3Q9NR23 364 aa18.41■□□□□ 0.54
SHKBP1-227ENST00000602011 MAN1B1Q9UKM7 699 aa18.41■□□□□ 0.54
SHKBP1-227ENST00000602011 ASXL3Q9C0F0 2248 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 A0A1W2PP55 124 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 FAM47DPA6NHR8 397 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 KCNU1A8MYU2 1149 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 PPP1R3GB7ZBB8 358 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 TRUB2O95900 331 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 KRT5P13647 590 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 ABCB4P21439 1286 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 TACR2P21452 398 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 CDK17Q00537 523 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 FSCBQ5H9T9 825 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 EFHC1Q5JVL4 640 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 LGI2Q8N0V4 545 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 SPAG5Q96R06 1193 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 UBE2TQ9NPD8 197 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 ASNSD1Q9NWL6 643 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 DMTF1Q9Y222 760 aa18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 GCN1Q92616 2671 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-227ENST00000602011 TMEM131Q92545 1883 aa18.39■□□□□ 0.54
SHKBP1-227ENST00000602011 TRABD2BA6NFA1 517 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 ZIC2O95409 532 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 MOCS2O96007 188 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 IGLV3-25P01717 112 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 ITGAVP06756 1048 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 CCR1P32246 355 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 RXRGP48443 463 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 CYP4F3Q08477 520 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 CCDC15Q0P6D6 951 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 EIF4EBP2Q13542 120 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 ZC3H12AQ5D1E8 599 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 SYPL2Q5VXT5 272 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 KLHL10Q6JEL2 608 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 PRPF39Q86UA1 669 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 TAC4Q86UU9 113 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 IQCHQ86VS3 1027 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 CHSY1Q86X52 802 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 PTPRN2Q92932 1015 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 KREMEN1Q96MU8 473 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 AASDHPPTQ9NRN7 309 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 SLCO3A1Q9UIG8 710 aa18.39■□□□□ 0.53
SHKBP1-227ENST00000602011 A0A1B0GVM2 712 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 TCAF2A6NFQ2 919 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 TLR4O00206 839 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 LATO43561 262 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 LDOC1O95751 146 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 CD44P16070 742 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 HNF1BP35680 557 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 IL9RQ01113 521 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 PAK1Q13153 545 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 ILKQ13418 452 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 CAMK2BQ13554 666 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 MORC3Q14149 939 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 ACBD5Q5T8D3 534 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 RAP1GAP2Q684P5 730 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 ARHGEF19Q8IW93 802 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 MFSD2AQ8NA29 543 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 OR14C36Q8NHC7 312 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 ERCC4Q92889 916 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 FAM131CQ96AQ9 280 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 SLC6A18Q96N87 628 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 NOX5Q96PH1 765 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 INTS2Q9H0H0 1204 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 MTG2Q9H4K7 406 aa18.38■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3DA0A087WVF3 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3IA0A087WXS9 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3EA0A087X179 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3KA0A087X1G2 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 A0A1W2PR77 199 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3FA6NER0 549 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3LB9A6J9 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 ALOX15BO15296 676 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 IL1BP01584 269 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3HP0C7X1 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 MZF1P28698 734 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 GNA15P30679 374 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 ADPRHP54922 357 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3GQ6DHY5 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3CQ6IPX1 549 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 DENND1BQ6P3S1 775 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 TBC1D3Q8IZP1 549 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 CCAR2Q8N163 923 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 CACTIN-AS1Q8N1I8 211 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 STK40Q8N2I9 435 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 ADAM32Q8TC27 787 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 SAP25Q8TEE9 199 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 OR8D1Q8WZ84 308 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 SERAC1Q96JX3 654 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 SRRTQ9BXP5 876 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 SERGEFQ9UGK8 458 aa18.37■□□□□ 0.53
SHKBP1-227ENST00000602011 A0A087WV48 116 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms