RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ATXN1P54253 815 aaKnown RBP10.37□□□□□ -0.75
UPF1-213ENST00000601981 OXCT1P55809 520 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 STARD6P59095 220 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 MRPS25P82663 173 aaKnown RBP10.37□□□□□ -0.75
UPF1-213ENST00000601981 SCAPQ12770 1279 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 CDH18Q13634 790 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 LRRC32Q14392 662 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 TAZQ16635 292 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 ODF2Q5BJF6 829 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 SH3PXD2AQ5TCZ1 1133 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 PIK3R6Q5UE93 754 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 GRAMD4Q6IC98 578 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 EMBQ6PCB8 327 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 RFWD3Q6PCD5 774 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 SPOCD1Q6ZMY3 1216 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 TEKT4Q8WW24 435 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 CASKIN2Q8WXE0 1202 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 SLCO2A1Q92959 643 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 EPAS1Q99814 870 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 OSBPL2Q9H1P3 480 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 RETREG1Q9H6L5 497 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 TBC1D17Q9HA65 648 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 EPB41L5Q9HCM4 733 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 DNAJC17Q9NVM6 304 aaKnown RBP10.37□□□□□ -0.75
UPF1-213ENST00000601981 DONSONQ9NYP3 566 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 CALCOCO1Q9P1Z2 691 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 USP18Q9UMW8 372 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 EFR3BQ9Y2G0 817 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 UTP11Q9Y3A2 253 aaKnown RBP10.37□□□□□ -0.75
UPF1-213ENST00000601981 HS3ST4Q9Y661 456 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 ATG2BQ96BY7 2078 aa10.37□□□□□ -0.75
UPF1-213ENST00000601981 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 A0A1B0GVM2 712 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TCAF2A6NFQ2 919 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ZSCAN5CA6NGD5 496 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 C3orf70A6NLC5 250 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 H0Y626 953 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TRDMT1O14717 391 aaKnown RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 MAP2K7O14733 419 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 GPR37L1O60883 481 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 CLDN11O75508 207 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TJP3O95049 919 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 IL1R2P27930 398 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 SLC6A4P31645 630 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 HTR7P34969 479 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 CDKN2BP42772 138 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 PTGIRP43119 386 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 MAGEA9P43362 315 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 SOX9P48436 509 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 DGKGP49619 791 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 NRG1Q02297 640 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 UBXN2BQ14CS0 331 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 PON2Q15165 354 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 CCNG2Q16589 344 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FBXO43Q4G163 708 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ATP13A4Q4VNC1 1196 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 BOLA3Q53S33 107 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TFDP3Q5H9I0 405 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TMEM31Q5JXX7 168 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 DGKKQ5KSL6 1271 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ZFYVE27Q5T4F4 411 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TXNRD3NBQ6F5E7 133 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 NADSYN1Q6IA69 706 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 TTC27Q6P3X3 843 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 CCDC137Q6PK04 289 aaKnown RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 MFSD7Q6UXD7 560 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 HDXQ7Z353 690 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 VSIG1Q86XK7 387 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FLCNQ8NFG4 579 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 GRK7Q8WTQ7 553 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 RAPGEF5Q92565 580 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 BHMTQ93088 406 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 CAVIN3Q969G5 261 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 TBC1D31Q96DN5 1066 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ERP44Q9BS26 406 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 HERPUD2Q9BSE4 406 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FUT8Q9BYC5 575 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FRMD8P1Q9BZ68 369 aaPredicted RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 OSBPL6Q9BZF3 934 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ZWILCHQ9H900 591 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 LTB4R2Q9NPC1 389 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 ARHGEF4Q9NR80 690 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FAM114A2Q9NRY5 505 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 PLK2Q9NYY3 685 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 OR12D3Q9UGF7 316 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 PCSK1NQ9UHG2 260 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 XPO7Q9UIA9 1087 aaKnown RBP10.36□□□□□ -0.75
UPF1-213ENST00000601981 VANGL2Q9ULK5 521 aa10.36□□□□□ -0.75
UPF1-213ENST00000601981 FZD10Q9ULW2 581 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms