RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 KCNK3O14649 394 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 DKK1O94907 266 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 ADH1BP00325 375 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 ATXN1LP0C7T5 689 aaKnown RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 PDGFRAP16234 1089 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 GOT1P17174 413 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 MZF1P28698 734 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 STK19P49842 368 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 CCT8P50990 548 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 SNX16P57768 344 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 ELAVL3Q14576 367 aaKnown RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 FBXL22Q6P050 247 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 C11orf57Q6ZUT1 292 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 SND1Q7KZF4 910 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 PASD1Q8IV76 773 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 AADATQ8N5Z0 425 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 SKA1Q96BD8 255 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 TPX2Q9ULW0 747 aaKnown RBP17.52■□□□□ 0.4
SCAF1-204ENST00000601038 SYNJ2BP-COX16A0A087WUM0 186 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 GRAP2O75791 330 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 KRT9P35527 623 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 GRK6P43250 576 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 MTIF2P46199 727 aaKnown RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 PSMD8P48556 350 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 VASPP50552 380 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 CCR5P51681 352 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 C21orf59P57076 290 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 SCAPQ12770 1279 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 AUHQ13825 339 aaKnown RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 KCNJ12Q14500 433 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 OR6B2Q6IFH4 312 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 CXorf57Q6NSI4 855 aaKnown RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 OLFML1Q6UWY5 402 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 FAM183BPQ6ZVS7 135 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 CIR1Q86X95 450 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 C1orf131Q8NDD1 294 aaKnown RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 TMEM131Q92545 1883 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 RPRD1AQ96P16 312 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 EBF2Q9HAK2 575 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 COX16Q9P0S2 106 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 DNAJC12Q9UKB3 198 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 RALYQ9UKM9 306 aaKnown RBP17.51■□□□□ 0.39
SCAF1-204ENST00000601038 PLXNB3Q9ULL4 1909 aa17.51■□□□□ 0.39
SCAF1-204ENST00000601038 TAF4O00268 1085 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
SCAF1-204ENST00000601038 TNFSF14O43557 240 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 IL1BP01584 269 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 ERBB2P04626 1255 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 NOS2P35228 1153 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 CLCN1P35523 988 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 ADPRHP54922 357 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 NME3Q13232 169 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 SLC26A9Q7LBE3 791 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 TMPRSS7Q7RTY8 843 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 ZNF397Q8NF99 534 aaPredicted RBP17.5■□□□□ 0.39
SCAF1-204ENST00000601038 OR14C36Q8NHC7 312 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 FRS2Q8WU20 508 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 ALG14Q96F25 216 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 SLC6A18Q96N87 628 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 SPAG5Q96R06 1193 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 FEM1AQ9BSK4 669 aa17.5■□□□□ 0.39
SCAF1-204ENST00000601038 AJAP1Q9UKB5 411 aaPredicted RBP17.5■□□□□ 0.39
SCAF1-204ENST00000601038 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.49■□□□□ 0.39
SCAF1-204ENST00000601038 A0A1B0GTQ1 180 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 DAB1O75553 588 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 WNT1P04628 370 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 VAV1P15498 845 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 CD38P28907 300 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 BPIFB4P59827 614 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 CENPCQ03188 943 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 ZNF177Q13360 481 aaPredicted RBP17.49■□□□□ 0.39
SCAF1-204ENST00000601038 MAN2A1Q16706 1144 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 TPD52L1Q16890 204 aaPredicted RBP17.49■□□□□ 0.39
SCAF1-204ENST00000601038 INAVAQ3KP66 663 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 C5orf22Q49AR2 442 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 SLC47A2Q86VL8 602 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 ZDHHC17Q8IUH5 632 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 SYNCQ9H7C4 482 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 AASDHPPTQ9NRN7 309 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 RRN3Q9NYV6 651 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 VANGL2Q9ULK5 521 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 HS3ST4Q9Y661 456 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 PTPRBP23467 1997 aa17.49■□□□□ 0.39
SCAF1-204ENST00000601038 PLXNA2O75051 1894 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 ZFHX4Q86UP3 3567 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 A0A1W2PR77 199 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 M0QYT0 321 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 ATP9BO43861 1147 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 PAGE1O75459 146 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 CLDN11O75508 207 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 DRD3P35462 400 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 NUMBP49757 651 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 ACCSLQ4AC99 568 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 PTPN20Q4JDL3 420 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.48■□□□□ 0.39
SCAF1-204ENST00000601038 DSG4Q86SJ6 1040 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms