RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TULP3O75386 442 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 APOC2P02655 101 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 APODP05090 189 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ATP5BP06576 529 aaKnown RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ASGR2P07307 311 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 PYGMP11217 842 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 CASQ1P31415 396 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 OPRD1P41143 372 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 PDK1Q15118 436 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ALFQ53S48 1182 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 INO80DQ53TQ3 878 aaPredicted RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 DAB2IPQ5VWQ8 1189 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 TRIM68Q6AZZ1 485 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ZNF852Q6ZMS4 543 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 PQLC3Q8N755 202 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 DCAF4L2Q8NA75 395 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ACTRT1Q8TDG2 376 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 UCMAQ8WVF2 138 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ZFYVE19Q96K21 471 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ZNF599Q96NL3 588 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 FERMT1Q9BQL6 677 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 FEM1AQ9BSK4 669 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 C2orf49Q9BVC5 232 aaPredicted RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
TGFB1-204ENST00000600196 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 HAUS2Q9NVX0 235 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 GTSE1Q9NYZ3 720 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 AMACRQ9UHK6 382 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 PIAS3Q9Y6X2 628 aa12.61□□□□□ -0.39
TGFB1-204ENST00000600196 DOCK4Q8N1I0 1966 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 OTOL1A6NHN0 477 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 MTSS1O43312 755 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 KDELR3O43731 214 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CNTN5O94779 1100 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 RHOCP08134 193 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CD48P09326 243 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PABPC1P11940 636 aaKnown RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 AMPD1P23109 780 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 SP100P23497 879 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 MAGEA9P43362 315 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CLCN6P51797 869 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 GNA12Q03113 381 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 TNK2Q07912 1038 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 GRSF1Q12849 480 aaKnown RBP eCLIP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 KLF1Q13351 362 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 POLD3Q15054 466 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 TMEM196Q5HYL7 178 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 TIGD7Q6NT04 549 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 RETSATQ6NUM9 610 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 DRICH1Q6PGQ1 229 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 ANKS1BQ7Z6G8 1248 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 CARNMT1Q8N4J0 409 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PLD5Q8N7P1 536 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 TTC16Q8NEE8 873 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 P3H4Q92791 437 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 ALG14Q96F25 216 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
TGFB1-204ENST00000600196 MPP6Q9NZW5 540 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 GGA2Q9UJY4 613 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 OR51B4Q9Y5P0 310 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
TGFB1-204ENST00000600196 PPP1R12AO14974 1030 aaPredicted RBP12.59□□□□□ -0.39
TGFB1-204ENST00000600196 CST8O60676 142 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 KAT7O95251 611 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 TNNT1P13805 278 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.39
TGFB1-204ENST00000600196 CCNCP24863 283 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 HLA-FP30511 346 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 GJC1P36383 396 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 NNMTP40261 264 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 GALK1P51570 392 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
TGFB1-204ENST00000600196 ZXDAP98168 799 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 GALNT2Q10471 571 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 SERINC3Q13530 473 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 PLEKHG6Q3KR16 790 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
TGFB1-204ENST00000600196 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
TGFB1-204ENST00000600196 KIF18AQ8NI77 898 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms